RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA1240805" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA1240805 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1050451 1050451 PRJNA1240805_P_NODE_1201_length_454_cov_16.288889_g1153_i0 PRJNA1240805 1201 454 16.288889 73.95155606 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 540 7.71e-149   NTclustered gi|440222375|gb|JX030043.1| 5659 g1153 i0 89.062 135.960352422907 448 31 96 14 17 454 1321 1760 Leishmania amazonensis isolate LaPH8.rRNA.13 28S ribosomal RNA (LSU-alpha), partial sequence blastn 61726 540 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
2900266 2900266 PRJNA1240805_P_NODE_3703_length_240_cov_2.832461_g3654_i0 PRJNA1240805 3703 240 2.832461 6.7979064 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 93.5 1.27e-14   NTclustered gi|118574972|gb|EF108310.1| 56452 g3654 i0 80.159 29.8708333333333 126 23 52 2 24 148 226 102 Petalomonas cantuscygni strain CCAP 1259/1 large subunit ribosomal RNA (rnl) gene, partial sequence blastn 7169 93.5 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
2900273 2900273 PRJNA1240805_P_NODE_4123_length_226_cov_14.169492_g4074_i0 PRJNA1240805 4123 226 14.169492 32.02305192 Neobodo sp. 2815825 Euglenozoa other_Eukaryota 182 2.46e-41   NTclustered gi|1996609214|gb|MW694333.1| 2815825 g4074 i0 90.58 1.64159292035398 138 11 60 1 91 226 665 802 Neobodo sp. isolate G08 small subunit ribosomal RNA gene, partial sequence blastn 371 182 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp.
6153271 6153271 PRJNA1240805_P_NODE_8925_length_154_cov_6.142857_g8876_i0 PRJNA1240805 8925 154 6.142857 9.45999978 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 263 5.36e-66   NTclustered gi|440222381|gb|JX030049.1| 5659 g8876 i0 97.419 144.766233766234 155 3 100 1 1 154 710 556 Leishmania amazonensis isolate LaPH8.rRNA.25 28S ribosomal RNA (LSU-beta), partial sequence blastn 22294 263 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
9277662 9277662 PRJNA1240805_P_NODE_1748_length_367_cov_10.886792_g1699_i0 PRJNA1240805 1748 367 10.886792 39.95452664 Trachelomonas magdaleniana 472057 Euglenozoa other_Eukaryota 183 1.18e-41   NTclustered gi|157703460|gb|EF999911.1| 472057 g1699 i0 78.193 25.8474114441417 321 47 82 12 3 303 318 1 Trachelomonas magdaleniana large subunit ribosomal RNA gene, partial sequence blastn 9486 183 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Trachelomonas Trachelomonas magdaleniana
9978571 9978571 PRJNA1240805_P_NODE_3768_length_238_cov_5.507937_g3719_i0 PRJNA1240805 3768 238 5.507937 13.10889006 Leishmania 5658 Euglenozoa other_Eukaryota 246 9.139999999999999e-61   NTclustered gi|2593250474|emb|OY748421.1| 5660 g3719 i0 87.5 100.289915966387 216 24 89 3 14 226 990125 989910 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 23869 246 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
11828114 11828114 PRJNA1240805_P_NODE_4650_length_212_cov_7.687117_g4601_i0 PRJNA1240805 4650 212 7.687117 16.29668804 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 161 2.9699999999999997e-35   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g4601 i0 82.796 0.877358490566038 186 27 86 5 1 183 456 273 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 186 161 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
13103306 13103306 PRJNA1240805_P_NODE_6551_length_179_cov_1.692308_g6502_i0 PRJNA1240805 6551 179 1.692308 3.02923132 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 102 1.48e-17   NTclustered gi|1273111679|gb|MG283141.1| 71804 g6502 i0 92.958 35.5251396648045 71 4 39 1 110 179 218 288 Trypanosoma grayi isolate 237-51-00211b-1-40-10_ITS1 internal transcribed spacer 2 and large subunit ribosomal RNA gene, partial sequence blastn 6359 102 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
13803920 13803920 PRJNA1240805_P_NODE_5191_length_200_cov_5.655629_g5142_i0 PRJNA1240805 5191 200 5.655629 11.311258 Diplonema 91373 Euglenozoa other_Eukaryota 100 6.12e-17   NTclustered gi|560190589|gb|KF633467.1| 91374 g5142 i0 86.813 25.52 91 10 46 2 87 177 2568 2480 Diplonema papillatum strain ATCC 50162 28S ribosomal RNA gene, complete sequence blastn 5104 100 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
18201154 18201154 PRJNA1240805_P_NODE_2295_length_314_cov_5.162264_g2246_i0 PRJNA1240805 2295 314 5.162264 16.20950896 Petalomonas cantuscygni 56452 Euglenozoa other_Eukaryota 239 2.1e-58   NTclustered gi|118574972|gb|EF108310.1| 56452 g2246 i0 86.636 21.0127388535032 217 27 69 2 27 242 20 235 Petalomonas cantuscygni strain CCAP 1259/1 large subunit ribosomal RNA (rnl) gene, partial sequence blastn 6598 239 1 Eukaryota Discoba   Euglenozoa Euglenida Petalomonadida Scytomonadidae Petalomonas Petalomonas cantuscygni
20750958 20750958 PRJNA1240805_P_NODE_3977_length_231_cov_7.181319_g3928_i0 PRJNA1240805 3977 231 7.181319 16.58884689 uncultured kinetoplastid 204529 Euglenozoa other_Eukaryota 283 6.72e-72   NTclustered gi|375343691|gb|JN629775.1| 204529 g3928 i0 91.469 90.7186147186147 211 10 90 7 1 208 438 233 Uncultured kinetoplastid clone GB_2 18S ribosomal RNA gene, partial sequence blastn 20956 283 1 Eukaryota Discoba   Euglenozoa Kinetoplastea       uncultured kinetoplastid

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;