contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA1240804" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4174867 | 4174867 | PRJNA1240804_P_NODE_19364_length_315_cov_9.421053_g18998_i0 | PRJNA1240804 | 19364 | 315 | 9.421053 | 29.67631695 | Parachlamydiaceae bacterium | 2052176 | Bacteria | Bacteria | 372 | 1.99e-98 | NTclustered | gi|1869331976|gb|CP058704.1| | 2052176 | g18998 | i0 | 92.941 | 124.526984126984 | 255 | 18 | 81 | 0 | 54 | 308 | 835389 | 835643 | Parachlamydiaceae bacterium isolate SSA5 chromosome | blastn | 39226 | 372 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium | ||
| 4877937 | 4877937 | PRJNA1240804_P_NODE_102204_length_172_cov_1.260163_g101838_i0 | PRJNA1240804 | 102204 | 172 | 1.260163 | 2.16748036 | Parachlamydiales | 1963360 | Bacteria | Bacteria | 243 | 7.979999999999999e-60 | NTclustered | gi|1691252667|emb|BX908798.2| | 264201 | g101838 | i0 | 94.34 | 115.354651162791 | 159 | 8 | 92 | 1 | 1 | 158 | 1250932 | 1251090 | Candidatus Protochlamydia amoebophila UWE25 complete genome | blastn | 19841 | 243 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 10551173 | 10551173 | PRJNA1240804_P_NODE_12469_length_374_cov_3.593846_g12104_i0 | PRJNA1240804 | 12469 | 374 | 3.593846 | 13.44098404 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 490 | 6.36e-134 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g12104 | i0 | 91.761 | 458.729946524064 | 352 | 29 | 94 | 0 | 15 | 366 | 653292 | 652941 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 171565 | 490 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 10552034 | 10552034 | PRJNA1240804_P_NODE_30289_length_265_cov_1.712963_g29923_i0 | PRJNA1240804 | 30289 | 265 | 1.712963 | 4.53935195 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 335 | 2.149999999999999e-87 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g29923 | i0 | 89.811 | 178.675471698113 | 265 | 22 | 99 | 5 | 4 | 265 | 1249428 | 1249166 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 47349 | 335 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 11826424 | 11826424 | PRJNA1240804_P_NODE_170_length_1828_cov_4.599775_g92_i0 | PRJNA1240804 | 170 | 1828 | 4.599775 | 84.083887 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 2169 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g92 | i0 | 88.39 | 184.098468271335 | 1826 | 180 | 99 | 29 | 15 | 1828 | 655359 | 653554 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 336532 | 2169 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 14375820 | 14375820 | PRJNA1240804_P_NODE_105892_length_169_cov_2.366667_g105526_i0 | PRJNA1240804 | 105892 | 169 | 2.366667 | 3.99966723 | Parachlamydiaceae bacterium CRIB38 | 553506 | Bacteria | Bacteria | 196 | 6.16e-46 | NTclustered | gi|196051291|gb|EU683886.1| | 553506 | g105526 | i0 | 89.809 | 88.9763313609467 | 157 | 11 | 92 | 5 | 15 | 169 | 98 | 251 | Parachlamydiaceae bacterium CRIB38 16S ribosomal RNA gene, partial sequence | blastn | 15037 | 196 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydiaceae bacterium CRIB38 | ||
| 16925621 | 16925621 | PRJNA1240804_P_NODE_49154_length_220_cov_1.637427_g48788_i0 | PRJNA1240804 | 49154 | 220 | 1.637427 | 3.6023394 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 348 | 2.2200000000000005e-91 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g48788 | i0 | 97.087 | 149.063636363636 | 206 | 6 | 94 | 0 | 1 | 206 | 653893 | 654098 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 32794 | 348 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 21452202 | 21452202 | PRJNA1240804_P_NODE_72897_length_191_cov_1.830986_g72531_i0 | PRJNA1240804 | 72897 | 191 | 1.830986 | 3.49718326 | Parachlamydia | 83551 | Bacteria | Bacteria | 287 | 4.14e-73 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g72531 | i0 | 93.75 | 118.774869109948 | 192 | 11 | 100 | 1 | 1 | 191 | 845 | 1036 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 22686 | 287 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 22023534 | 22023534 | PRJNA1240804_P_NODE_10318_length_403_cov_2.290960_g9955_i0 | PRJNA1240804 | 10318 | 403 | 2.29096 | 9.2325688 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 508 | 1.91e-139 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g9955 | i0 | 90.256 | 96.697270471464 | 390 | 37 | 97 | 1 | 1 | 389 | 1250660 | 1250271 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 38969 | 508 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 23301567 | 23301567 | PRJNA1240804_P_NODE_86279_length_182_cov_1.496241_g85913_i0 | PRJNA1240804 | 86279 | 182 | 1.496241 | 2.72315862 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 143 | 8.93e-30 | NTclustered | gi|194594624|gb|EU662269.1| | 112235 | g85913 | i0 | 82.927 | 1.35164835164835 | 164 | 22 | 89 | 3 | 7 | 168 | 1715 | 1556 | Neochlamydia hartmannellae strain ATCC 50802 23S ribosomal RNA gene, partial sequence | blastn | 246 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;