RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1240804" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1240804 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2897890 2897890 PRJNA1240804_P_NODE_119883_length_167_cov_0.881356_g119517_i0 PRJNA1240804 119883 167 0.881356 1.47186452 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 113 6.34e-21   NTclustered gi|2874254090|emb|OY970173.1| 2053570 g119517 i0 85.849 11.4550898203593 106 15 63 0 25 130 929966 929861 MAG: Candidatus Latescibacteria bacterium isolate MFD02242.bin.1.32 genome assembly, chromosome: 1 blastn 1913 113 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
16352586 16352586 PRJNA1240804_P_NODE_33633_length_254_cov_1.965854_g33267_i0 PRJNA1240804 33633 254 1.965854 4.99326916 Pseudomonadati 3379134 Bacteria Bacteria 239 1.65e-58   NTclustered gi|2531976020|emb|OY282352.1| 199737 g33267 i0 90.96 20.7362204724409 177 16 70 0 30 206 4200575 4200751 MAG: uncultured Latescibacteria bacterium genome assembly, chromosome: 1 blastn 5267 241 0.991701244813278 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;