RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1240804" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1240804 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9978311 9978311 PRJNA1240804_P_NODE_4828_length_544_cov_10.503030_g4473_i0 PRJNA1240804 4828 544 10.50303 57.1364832 Pseudomonadati 3379134 Bacteria Bacteria 305 3.72e-78   NTclustered gi|2836248203|gb|CP121312.1| 2024824 g4473 i0 77.84 176.413602941176 537 90 97 21 1 530 1167461 1167975 MAG: Balneola sp. isolate NCC532_bact_2881 chromosome blastn 95969 305 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
20748294 20748294 PRJNA1240804_P_NODE_105837_length_169_cov_2.608333_g105471_i0 PRJNA1240804 105837 169 2.608333 4.40808277 Balneolaceae bacterium 2053516 Bacteria Bacteria 148 1.75e-31   NTclustered gi|1702192188|gb|CP030887.1| 2053516 g105471 i0 83.974 2.28994082840237 156 23 91 2 15 168 1469371 1469526 MAG: Balneolaceae bacterium isolate ECT2AJA-110-D chromosome blastn 387 148 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;