contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1240804" and tax_phylum = "Armatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 349177 | 349177 | PRJNA1240804_P_NODE_9501_length_417_cov_2.274457_g9139_i0 | PRJNA1240804 | 9501 | 417 | 2.274457 | 9.48448569 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 182 | 4.9e-41 | NTclustered | gi|2314718026|dbj|AP024674.1| | 2033014 | g9139 | i0 | 85.714 | 179.726618705036 | 175 | 21 | 41 | 4 | 9 | 180 | 1692704 | 1692877 | MAG: Armatimonadetes bacterium KatS3mg024 DNA, complete genome | blastn | 74946 | 182 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 1622867 | 1622867 | PRJNA1240804_P_NODE_42082_length_233_cov_1.657609_g41716_i0 | PRJNA1240804 | 42082 | 233 | 1.657609 | 3.86222897 | Chthonomonadaceae bacterium | 2739509 | Bacteria | Bacteria | 207 | 4.21e-49 | NTclustered | gi|1938770100|gb|CP054189.1| | 2739509 | g41716 | i0 | 84.071 | 182.836909871245 | 226 | 24 | 94 | 12 | 1 | 220 | 126440 | 126659 | MAG: Chthonomonadaceae bacterium isolate H1_ARM1 chromosome, complete genome | blastn | 42601 | 207 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonadaceae bacterium | |||
| 6726248 | 6726248 | PRJNA1240804_P_NODE_51406_length_217_cov_0.994048_g51040_i0 | PRJNA1240804 | 51406 | 217 | 0.994048 | 2.15708416 | Fimbriimonas sp. | 1936159 | Bacteria | Bacteria | 263 | 8.13e-66 | NTclustered | gi|2778022393|emb|OZ123194.1| | 1936159 | g51040 | i0 | 90.196 | 42.9308755760369 | 204 | 17 | 93 | 3 | 15 | 216 | 1688871 | 1688669 | MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 | blastn | 9316 | 263 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas sp. | ||
| 8703095 | 8703095 | PRJNA1240804_P_NODE_44367_length_228_cov_4.067039_g44001_i0 | PRJNA1240804 | 44367 | 228 | 4.067039 | 9.27284892 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 246 | 8.69e-61 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g44001 | i0 | 87.85 | 90.4912280701754 | 214 | 21 | 93 | 5 | 1 | 212 | 29573 | 29783 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 20632 | 246 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 11253340 | 11253340 | PRJNA1240804_P_NODE_14729_length_351_cov_2.384106_g14364_i0 | PRJNA1240804 | 14729 | 351 | 2.384106 | 8.36821206 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 407 | 6.14e-109 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g14364 | i0 | 90.096 | 63.6096866096866 | 313 | 31 | 89 | 0 | 6 | 318 | 27891 | 28203 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 22327 | 407 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 11253371 | 11253371 | PRJNA1240804_P_NODE_16669_length_334_cov_19.150877_g16304_i0 | PRJNA1240804 | 16669 | 334 | 19.150877 | 63.96392918 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 472 | 2.04e-128 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g16304 | i0 | 95.593 | 404.050898203593 | 295 | 12 | 88 | 1 | 3 | 296 | 27230 | 26936 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 134953 | 472 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 13100563 | 13100563 | PRJNA1240804_P_NODE_101911_length_172_cov_1.487805_g101545_i0 | PRJNA1240804 | 101911 | 172 | 1.487805 | 2.5590246 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 187 | 3.79e-43 | NTclustered | gi|2314718026|dbj|AP024674.1| | 2033014 | g101545 | i0 | 93.651 | 233.773255813953 | 126 | 6 | 73 | 2 | 10 | 134 | 1692754 | 1692878 | MAG: Armatimonadetes bacterium KatS3mg024 DNA, complete genome | blastn | 40209 | 187 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 17627615 | 17627615 | PRJNA1240804_P_NODE_111414_length_168_cov_4.487395_g111048_i0 | PRJNA1240804 | 111414 | 168 | 4.487395 | 7.5388236 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 241 | 2.81e-59 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g111048 | i0 | 95.946 | 458.142857142857 | 148 | 6 | 88 | 0 | 21 | 168 | 26868 | 27015 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 76968 | 241 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 17627890 | 17627890 | PRJNA1240804_P_NODE_31334_length_261_cov_4.117925_g30968_i0 | PRJNA1240804 | 31334 | 261 | 4.117925 | 10.74778425 | Chthonomonas | 1077265 | Bacteria | Bacteria | 235 | 2.1999999999999997e-57 | NTclustered | gi|526641997|ref|NR_103994.1| | 454171 | g30968 | i0 | 85.526 | 1.74712643678161 | 228 | 30 | 87 | 3 | 16 | 241 | 1218 | 1444 | Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence | blastn | 456 | 235 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonas | Chthonomonas calidirosea | ||
| 17628036 | 17628036 | PRJNA1240804_P_NODE_61454_length_203_cov_1.292208_g61088_i0 | PRJNA1240804 | 61454 | 203 | 1.292208 | 2.62318224 | Capsulimonas | 2494209 | Bacteria | Bacteria | 244 | 2.72e-60 | NTclustered | gi|2874253701|emb|OY969427.1| | 157466 | g61088 | i0 | 91.62 | 561.940886699507 | 179 | 11 | 87 | 4 | 27 | 203 | 3408007 | 3407831 | MAG: uncultured Armatimonadetes bacterium isolate MFD09671.bin.1.19 genome assembly, chromosome: 1 | blastn | 114074 | 244 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 18200599 | 18200599 | PRJNA1240804_P_NODE_73675_length_191_cov_1.169014_g73309_i0 | PRJNA1240804 | 73675 | 191 | 1.169014 | 2.23281674 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 84.2 | 5.83e-12 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g73309 | i0 | 93.103 | 26.5130890052356 | 58 | 3 | 30 | 1 | 15 | 71 | 589981 | 590038 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 5064 | 84.2 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 22023766 | 22023766 | PRJNA1240804_P_NODE_117138_length_167_cov_2.457627_g116772_i0 | PRJNA1240804 | 117138 | 167 | 2.457627 | 4.10423709 | Armatimonadota bacterium | 2033014 | Bacteria | Bacteria | 63.9 | 6.47e-6 | NTclustered | gi|2621703062|emb|OY760504.1| | 2033014 | g116772 | i0 | 93.023 | 0.760479041916168 | 43 | 3 | 26 | 0 | 75 | 117 | 1170670 | 1170712 | MAG: Armatimonadota bacterium isolate be0b92b7-bbec-405b-9e81-a5dbe9f1ff7a genome assembly, chromosome: 1 | blastn | 127 | 63.9 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 22727104 | 22727104 | PRJNA1240804_P_NODE_33778_length_254_cov_1.239024_g33412_i0 | PRJNA1240804 | 33778 | 254 | 1.239024 | 3.14712096 | Armatimonadota | 67819 | Bacteria | Bacteria | 289 | 1.61e-73 | NTclustered | gi|1996217993|dbj|AP021858.1| | 2608984 | g33412 | i0 | 88.703 | 512.874015748032 | 239 | 24 | 94 | 3 | 5 | 242 | 34472 | 34708 | Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome | blastn | 130270 | 289 | 1 | Bacteria | Bacillati | Armatimonadota | Candidatus Nitrosymbiomonas | Candidatus Nitrosymbiomonas proteolyticus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;