RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1240804" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 6 ✖

bioproject 1

  • PRJNA1240804 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1050079 1050079 PRJNA1240804_P_NODE_26241_length_280_cov_1.956710_g25875_i0 PRJNA1240804 26241 280 1.95671 5.478788 root 1 Root_unresolved Root_unresolved 490 4.61e-134   NTclustered gi|2288721861|gb|OP218818.1| 10535 g25875 i0 100 94.6428571428571 265 0 95 0 3 267 1113 849 Unidentified adenovirus strain CHOP Ad5 blastn 26500 490 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
4877957 4877957 PRJNA1240804_P_NODE_1064_length_949_cov_5.573333_g824_i0 PRJNA1240804 1064 949 5.573333 52.89093017 root 1 Root_unresolved Root_unresolved 922 0   NTclustered gi|2616465679|gb|OR735196.1| 10515 g824 i0 99.801 97.6027397260274 502 1 98 0 12 513 3007 3508 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 92625 922 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
6152749 6152749 PRJNA1240804_P_NODE_1365_length_868_cov_5.406593_g1097_i0 PRJNA1240804 1365 868 5.406593 46.92922724 root 1 Root_unresolved Root_unresolved 1572 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g1097 i0 100 98.4043778801843 851 0 98 0 16 866 1702 2552 Unidentified adenovirus strain CHOP Ad5 blastn 85415 1572 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
7428075 7428075 PRJNA1240804_P_NODE_39486_length_239_cov_1.221053_g39120_i0 PRJNA1240804 39486 239 1.221053 2.91831667 root 1 Root_unresolved Root_unresolved 409 1.11e-109   NTclustered gi|1377596870|gb|MF044052.1| 10515 g39120 i0 99.554 93.7238493723849 224 1 94 0 2 225 2782 2559 human adenovirus 2 isolate HK91, complete genome blastn 22400 409 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
18901353 18901353 PRJNA1240804_P_NODE_104995_length_170_cov_1.479339_g104629_i0 PRJNA1240804 104995 170 1.479339 2.5148763 root 1 Root_unresolved Root_unresolved 283 4.63e-72   NTclustered gi|2288721861|gb|OP218818.1| 10535 g104629 i0 99.359 91.7647058823529 156 1 92 0 15 170 1244 1399 Unidentified adenovirus strain CHOP Ad5 blastn 15600 283 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
21451863 21451863 PRJNA1240804_P_NODE_146057_length_162_cov_2.150442_g145691_i0 PRJNA1240804 146057 162 2.150442 3.48371604 root 1 Root_unresolved Root_unresolved 274 2.64e-69   NTclustered gi|2288721861|gb|OP218818.1| 10535 g145691 i0 100 91.358024691358 148 0 91 0 15 162 1475 1622 Unidentified adenovirus strain CHOP Ad5 blastn 14800 274 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;