contig_metadata
37 rows where analysis = "blastn", bioproject = "PRJNA1237888" and tax_phylum = "Chordata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 346533 | 346533 | PRJNA1237888_S_NODE_1541_length_332_cov_2.484099_g1491_i0 | PRJNA1237888 | 1541 | 332 | 2.484099 | 8.24720868 | Mus musculus | 10090 | Chordata | Chordata | 604 | 1.9099999999999992e-168 | NTclustered | gi|20381028|gb|BC028816.1| | 10090 | g1491 | i0 | 100 | 97.8765060240964 | 327 | 0 | 98 | 0 | 1 | 327 | 6 | 332 | Mus musculus apolipoprotein E, mRNA (cDNA clone MGC:36251 IMAGE:5136415), complete cds | blastn | 32495 | 604 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1049745 | 1049745 | PRJNA1237888_S_NODE_5261_length_180_cov_1.190840_g5211_i0 | PRJNA1237888 | 5261 | 180 | 1.19084 | 2.143512 | Metazoa | 33208 | Chordata | Chordata | 333 | 4.87e-87 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g5211 | i0 | 100 | 100 | 180 | 0 | 100 | 0 | 1 | 180 | 1695 | 1516 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 18000 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2325177 | 2325177 | PRJNA1237888_S_NODE_6002_length_169_cov_1.616667_g5952_i0 | PRJNA1237888 | 6002 | 169 | 1.616667 | 2.73216723 | Mus | 10088 | Chordata | Chordata | 305 | 9.81e-79 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g5952 | i0 | 99.408 | 100 | 169 | 0 | 100 | 1 | 1 | 169 | 241 | 74 | Mus musculus strain ME mitochondrion, complete genome | blastn | 16900 | 305 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2897526 | 2897526 | PRJNA1237888_S_NODE_6043_length_169_cov_0.958333_g5993_i0 | PRJNA1237888 | 6043 | 169 | 0.958333 | 1.61958277 | Mus musculus | 10090 | Chordata | Chordata | 313 | 5.859999999999999e-81 | NTclustered | gi|1720353688|ref|XM_006495697.4| | 10090 | g5993 | i0 | 100 | 64.792899408284 | 169 | 0 | 100 | 0 | 1 | 169 | 7862 | 8030 | PREDICTED: Mus musculus fibronectin 1 (Fn1), transcript variant X1, mRNA | blastn | 10950 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2897533 | 2897533 | PRJNA1237888_S_NODE_7243_length_163_cov_0.912281_g7193_i0 | PRJNA1237888 | 7243 | 163 | 0.912281 | 1.48701803 | Mus musculus | 10090 | Chordata | Chordata | 54.7 | 0.004 | NTclustered | gi|54697225|gb|AC115846.7| | 10090 | g7193 | i0 | 100 | 0.177914110429448 | 29 | 0 | 18 | 0 | 13 | 41 | 113821 | 113849 | Mus musculus chromosome 1, clone RP24-245O4, complete sequence | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4173800 | 4173800 | PRJNA1237888_S_NODE_1804_length_307_cov_1.220930_g1754_i0 | PRJNA1237888 | 1804 | 307 | 1.22093 | 3.7482551 | Mus musculus | 10090 | Chordata | Chordata | 547 | 2.9999999999999995e-151 | NTclustered | gi|187951952|gb|BC138441.1| | 10090 | g1754 | i0 | 99.338 | 22.9934853420195 | 302 | 2 | 98 | 0 | 6 | 307 | 8565 | 8264 | Mus musculus Notch gene homolog 1 (Drosophila), mRNA (cDNA clone MGC:170066 IMAGE:8861461), complete cds | blastn | 7059 | 547 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4173837 | 4173837 | PRJNA1237888_S_NODE_7664_length_157_cov_2.629630_g7614_i0 | PRJNA1237888 | 7664 | 157 | 2.62963 | 4.1285191 | Mus musculus | 10090 | Chordata | Chordata | 291 | 2.52e-74 | NTclustered | gi|123237658|emb|CU207406.7| | 10090 | g7614 | i0 | 100 | 99.484076433121 | 157 | 0 | 100 | 0 | 1 | 157 | 56576 | 56732 | Mouse DNA sequence from clone DN-169A20 on chromosome 4, complete sequence | blastn | 15619 | 291 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5450131 | 5450131 | PRJNA1237888_S_NODE_1745_length_314_cov_2.671698_g1695_i0 | PRJNA1237888 | 1745 | 314 | 2.671698 | 8.38913172 | Spinus spinus | 160760 | Chordata | Chordata | 54.7 | 0.008 | NTclustered | gi|2917663466|emb|OZ228753.1| | 160760 | g1695 | i0 | 94.444 | 0.229299363057325 | 36 | 1 | 11 | 1 | 234 | 268 | 37205157 | 37205122 | Spinus spinus genome assembly, chromosome: 5 | blastn | 72 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Spinus | Spinus spinus | |
| 6152584 | 6152584 | PRJNA1237888_S_NODE_7485_length_162_cov_0.920354_g7435_i0 | PRJNA1237888 | 7485 | 162 | 0.920354 | 1.49097348 | Metazoa | 33208 | Chordata | Chordata | 52.8 | 0.013 | NTclustered | gi|1889930206|ref|XM_035840782.1| | 7739 | g7435 | i0 | 100 | 0.864197530864197 | 28 | 0 | 17 | 0 | 135 | 162 | 627 | 654 | PREDICTED: Branchiostoma floridae nucleolin-like (LOC118430073), mRNA | blastn | 140 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Leptocardii | Amphioxiformes | Branchiostomatidae | Branchiostoma | Branchiostoma floridae | |
| 6724521 | 6724521 | PRJNA1237888_S_NODE_7806_length_153_cov_5.490385_g7756_i0 | PRJNA1237888 | 7806 | 153 | 5.490385 | 8.40028905 | Orycteropus afer | 9818 | Chordata | Chordata | 126 | 7.28e-25 | NTclustered | gi|2074162577|ref|XM_007959754.2| | 1230840 | g7756 | i0 | 81.699 | 1 | 153 | 26 | 99 | 2 | 2 | 153 | 406 | 557 | PREDICTED: Orycteropus afer afer myosin light chain 4 (MYL4), mRNA | blastn | 153 | 126 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Tubulidentata | Orycteropodidae | Orycteropus | Orycteropus afer | |
| 7427711 | 7427711 | PRJNA1237888_S_NODE_3846_length_208_cov_1.635220_g3796_i0 | PRJNA1237888 | 3846 | 208 | 1.63522 | 3.4012576 | Mus | 10088 | Chordata | Chordata | 385 | 1.58e-102 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g3796 | i0 | 100 | 100 | 208 | 0 | 100 | 0 | 1 | 208 | 747 | 540 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 20800 | 385 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8000012 | 8000012 | PRJNA1237888_S_NODE_2187_length_276_cov_1.647577_g2137_i0 | PRJNA1237888 | 2187 | 276 | 1.647577 | 4.54731252 | Cuculus canorus | 55661 | Chordata | Chordata | 60.2 | 1.52e-4 | NTclustered | gi|2452520419|ref|XM_054055672.1| | 55661 | g2137 | i0 | 97.143 | 2.20289855072464 | 35 | 1 | 13 | 0 | 222 | 256 | 67 | 101 | PREDICTED: Cuculus canorus aryl-hydrocarbon-interacting protein-like 1 (LOC128850691), partial mRNA | blastn | 608 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Cuculiformes | Cuculidae | Cuculus | Cuculus canorus | |
| 8000017 | 8000017 | PRJNA1237888_S_NODE_3147_length_228_cov_2.452514_g3097_i0 | PRJNA1237888 | 3147 | 228 | 2.452514 | 5.59173192 | Mus musculus | 10090 | Chordata | Chordata | 171 | 5.38e-38 | NTclustered | gi|2904934889|gb|PQ737812.1| | 10090 | g3097 | i0 | 81.034 | 53.4385964912281 | 232 | 29 | 100 | 12 | 1 | 228 | 235 | 15 | Mus musculus lncRNA222 lncRNA, complete sequence | blastn | 12184 | 171 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8000026 | 8000026 | PRJNA1237888_S_NODE_6107_length_169_cov_0.866667_g6057_i0 | PRJNA1237888 | 6107 | 169 | 0.866667 | 1.46466723 | Mus musculus | 10090 | Chordata | Chordata | 313 | 5.859999999999999e-81 | NTclustered | gi|354796481|gb|JN960982.1| | 10090 | g6057 | i0 | 100 | 99.9644970414201 | 169 | 0 | 100 | 0 | 1 | 169 | 29025 | 28857 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Rhoa:tm1a(EUCOMM)Wtsi; transgenic | blastn | 16894 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8702741 | 8702741 | PRJNA1237888_S_NODE_1227_length_361_cov_1.269231_g1177_i0 | PRJNA1237888 | 1227 | 361 | 1.269231 | 4.58192391 | Metazoa | 33208 | Chordata | Chordata | 58.4 | 7.36e-4 | NTclustered | gi|2219502493|ref|XM_047536074.1| | 30640 | g1177 | i0 | 100 | 1.85595567867036 | 31 | 0 | 9 | 0 | 196 | 226 | 32 | 2 | PREDICTED: Sciurus carolinensis APC membrane recruitment protein 1 (Amer1), mRNA | blastn | 670 | 58.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Sciuridae | Sciurus | Sciurus carolinensis | |
| 8702744 | 8702744 | PRJNA1237888_S_NODE_1867_length_300_cov_7.852590_g1817_i0 | PRJNA1237888 | 1867 | 300 | 7.85259 | 23.55777 | Passer | 9159 | Chordata | Chordata | 429 | 1.1e-115 | NTclustered | gi|1993855964|ref|XM_039727631.1| | 9160 | g1817 | i0 | 92.617 | 99.68 | 298 | 22 | 99 | 0 | 1 | 298 | 431 | 134 | PREDICTED: Passer montanus ribosomal protein L22 (RPL22), mRNA | blastn | 29904 | 429 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Passeridae | Passer | Passer montanus | |
| 9274898 | 9274898 | PRJNA1237888_S_NODE_88_length_970_cov_7.239957_g66_i0 | PRJNA1237888 | 88 | 970 | 7.239957 | 70.2275829 | Mus musculus | 10090 | Chordata | Chordata | 63.9 | 4.54e-5 | NTclustered | gi|51339183|gb|AC134414.12| | 10090 | g66 | i0 | 80.682 | 1.87731958762887 | 88 | 11 | 9 | 5 | 743 | 825 | 59931 | 59845 | Mus musculus chromosome 15, clone RP24-70H12, complete sequence | blastn | 1821 | 63.9 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9977897 | 9977897 | PRJNA1237888_S_NODE_2548_length_255_cov_0.966019_g2498_i0 | PRJNA1237888 | 2548 | 255 | 0.966019 | 2.46334845 | root | 1 | Root_unresolved | Root_unresolved | 470 | 5.4e-128 | NTclustered | gi|1102627096|ref|NM_001347129.1| | 10090 | g2498 | i0 | 100 | 98.8509803921569 | 254 | 0 | 99 | 0 | 1 | 254 | 393 | 646 | Mus musculus major urinary protein 7 (Mup7), mRNA | blastn | 25207 | 470 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10550693 | 10550693 | PRJNA1237888_S_NODE_1209_length_364_cov_1.730159_g1159_i0 | PRJNA1237888 | 1209 | 364 | 1.730159 | 6.29777876 | Mus musculus | 10090 | Chordata | Chordata | 673 | 0 | NTclustered | gi|74140001|dbj|AK153244.1| | 10090 | g1159 | i0 | 100 | 32.6648351648352 | 364 | 0 | 100 | 0 | 1 | 364 | 933 | 570 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129D19 product:lysozyme, full insert sequence | blastn | 11890 | 673 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10550709 | 10550709 | PRJNA1237888_S_NODE_3929_length_206_cov_2.191083_g3879_i0 | PRJNA1237888 | 3929 | 206 | 2.191083 | 4.51363098 | Mus musculus | 10090 | Chordata | Chordata | 379 | 7.269999999999998e-101 | NTclustered | gi|2510669988|gb|OQ871524.1| | 10090 | g3879 | i0 | 100 | 61.9805825242718 | 205 | 0 | 99 | 0 | 2 | 206 | 4709 | 4913 | Mus musculus clone BAC 46_1b 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence | blastn | 12768 | 379 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10550732 | 10550732 | PRJNA1237888_S_NODE_7069_length_164_cov_0.904348_g7019_i0 | PRJNA1237888 | 7069 | 164 | 0.904348 | 1.48313072 | Mus musculus | 10090 | Chordata | Chordata | 274 | 2.68e-69 | NTclustered | gi|354796902|gb|JN961403.1| | 10090 | g7019 | i0 | 98.701 | 3.75609756097561 | 154 | 2 | 94 | 0 | 9 | 162 | 23050 | 23203 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Nub1:tm1a(EUCOMM)Hmgu; transgenic | blastn | 616 | 274 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11825414 | 11825414 | PRJNA1237888_S_NODE_3690_length_212_cov_1.453988_g3640_i0 | PRJNA1237888 | 3690 | 212 | 1.453988 | 3.08245456 | Mus musculus | 10090 | Chordata | Chordata | 392 | 9.67e-105 | NTclustered | gi|74225281|dbj|AK152892.1| | 10090 | g3640 | i0 | 100 | 89.8490566037736 | 212 | 0 | 100 | 0 | 1 | 212 | 1165 | 1376 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089I05 product:cathepsin D, full insert sequence | blastn | 19048 | 392 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11825435 | 11825435 | PRJNA1237888_S_NODE_7010_length_164_cov_0.904348_g6960_i0 | PRJNA1237888 | 7010 | 164 | 0.904348 | 1.48313072 | Gallus gallus | 9031 | Chordata | Chordata | 294 | 2.06e-75 | NTclustered | gi|47564201|gb|AC147440.4| | 9031 | g6960 | i0 | 99.383 | 3.20121951219512 | 162 | 1 | 99 | 0 | 3 | 164 | 159192 | 159031 | Gallus gallus BAC clone CH261-49N7 from chromosome unknown, complete sequence | blastn | 525 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 13100490 | 13100490 | PRJNA1237888_S_NODE_3751_length_210_cov_3.161491_g3701_i0 | PRJNA1237888 | 3751 | 210 | 3.161491 | 6.6391311 | Coturnix japonica | 93934 | Chordata | Chordata | 102 | 1.8e-17 | NTclustered | gi|1810694127|ref|XM_032441636.1| | 93934 | g3701 | i0 | 89.024 | 0.39047619047619 | 82 | 9 | 39 | 0 | 3 | 84 | 409 | 328 | PREDICTED: Coturnix japonica ATP synthase membrane subunit c locus 2 (ATP5MC2), mRNA | blastn | 82 | 102 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Coturnix | Coturnix japonica | |
| 13100499 | 13100499 | PRJNA1237888_S_NODE_5091_length_183_cov_1.097015_g5041_i0 | PRJNA1237888 | 5091 | 183 | 1.097015 | 2.00753745 | Canis lupus | 9612 | Chordata | Chordata | 322 | 1.08e-83 | NTclustered | gi|48526373|gb|AY633660.1| | 9615 | g5041 | i0 | 98.361 | 27.3989071038251 | 183 | 3 | 100 | 0 | 1 | 183 | 99 | 281 | Canis familiaris clone 30 Bsp repeat region | blastn | 5014 | 322 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 15649635 | 15649635 | PRJNA1237888_S_NODE_4293_length_198_cov_2.416107_g4243_i0 | PRJNA1237888 | 4293 | 198 | 2.416107 | 4.78389186 | Mus musculus | 10090 | Chordata | Chordata | 364 | 1.9399999999999995e-96 | NTclustered | gi|74140001|dbj|AK153244.1| | 10090 | g4243 | i0 | 100 | 27.8484848484848 | 197 | 0 | 99 | 0 | 1 | 197 | 403 | 599 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129D19 product:lysozyme, full insert sequence | blastn | 5514 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16352259 | 16352259 | PRJNA1237888_S_NODE_6413_length_167_cov_0.881356_g6363_i0 | PRJNA1237888 | 6413 | 167 | 0.881356 | 1.47186452 | Mus | 10088 | Chordata | Chordata | 309 | 7.53e-80 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g6363 | i0 | 100 | 100 | 167 | 0 | 100 | 0 | 1 | 167 | 2030 | 1864 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 16700 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16923876 | 16923876 | PRJNA1237888_S_NODE_3034_length_232_cov_3.699454_g2984_i0 | PRJNA1237888 | 3034 | 232 | 3.699454 | 8.58273328 | Condylura cristata | 143302 | Chordata | Chordata | 54.7 | 0.006 | NTclustered | gi|830024879|ref|XM_004681466.2| | 143302 | g2984 | i0 | 100 | 0.387931034482759 | 29 | 0 | 13 | 0 | 138 | 166 | 434 | 406 | PREDICTED: Condylura cristata insulin-like growth factor binding protein 7 (IGFBP7), mRNA | blastn | 90 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Eulipotyphla | Talpidae | Condylura | Condylura cristata | |
| 20748154 | 20748154 | PRJNA1237888_S_NODE_1517_length_334_cov_3.035088_g1467_i0 | PRJNA1237888 | 1517 | 334 | 3.035088 | 10.13719392 | Mus musculus | 10090 | Chordata | Chordata | 617 | 2.48e-172 | NTclustered | gi|74140001|dbj|AK153244.1| | 10090 | g1467 | i0 | 100 | 22.8982035928144 | 334 | 0 | 100 | 0 | 1 | 334 | 1248 | 915 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129D19 product:lysozyme, full insert sequence | blastn | 7648 | 617 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 20748169 | 20748169 | PRJNA1237888_S_NODE_4497_length_194_cov_1.075862_g4447_i0 | PRJNA1237888 | 4497 | 194 | 1.075862 | 2.08717228 | Mus musculus | 10090 | Chordata | Chordata | 359 | 8.809999999999999e-95 | NTclustered | gi|74212563|dbj|AK152191.1| | 10090 | g4447 | i0 | 100 | 55.979381443299 | 194 | 0 | 100 | 0 | 1 | 194 | 66 | 259 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830054H02 product:cathepsin S, full insert sequence | blastn | 10860 | 359 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21451651 | 21451651 | PRJNA1237888_S_NODE_6037_length_169_cov_1.133333_g5987_i0 | PRJNA1237888 | 6037 | 169 | 1.133333 | 1.91533277 | Mus | 10088 | Chordata | Chordata | 313 | 5.859999999999999e-81 | NTclustered | gi|846387443|dbj|LC061935.1| | 10090 | g5987 | i0 | 100 | 100 | 169 | 0 | 100 | 0 | 1 | 169 | 1261 | 1429 | Mus musculus mitochondrion DNA, including ND2, tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, tRNA-Tyr, COX1 genes, complete sequence, sequence_id: (4078..6548)_5 | blastn | 16900 | 313 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22023467 | 22023467 | PRJNA1237888_S_NODE_6418_length_167_cov_0.881356_g6368_i0 | PRJNA1237888 | 6418 | 167 | 0.881356 | 1.47186452 | Mus musculus | 10090 | Chordata | Chordata | 309 | 7.53e-80 | NTclustered | gi|74142801|dbj|AK171428.1| | 10090 | g6368 | i0 | 100 | 56.5089820359281 | 167 | 0 | 100 | 0 | 1 | 167 | 70 | 236 | Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730215A05 product:matrix metalloproteinase 12, full insert sequence | blastn | 9437 | 309 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24001828 | 24001828 | PRJNA1237888_S_NODE_4219_length_200_cov_1.033113_g4169_i0 | PRJNA1237888 | 4219 | 200 | 1.033113 | 2.066226 | Mus | 10088 | Chordata | Chordata | 370 | 4.22e-98 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g4169 | i0 | 100 | 100 | 200 | 0 | 100 | 0 | 1 | 200 | 1317 | 1118 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 20000 | 370 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24572953 | 24572953 | PRJNA1237888_S_NODE_6600_length_166_cov_0.888889_g6550_i0 | PRJNA1237888 | 6600 | 166 | 0.888889 | 1.47555574 | Canis lupus | 9612 | Chordata | Chordata | 285 | 1.26e-72 | NTclustered | gi|124286928|gb|AC187296.11| | 9615 | g6550 | i0 | 97.59 | 108.60843373494 | 166 | 4 | 100 | 0 | 1 | 166 | 34494 | 34659 | Canis Familiaris chromosome 37, clone XX-85M13, complete sequence | blastn | 18029 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Carnivora | Canidae | Canis | Canis lupus | |
| 24572961 | 24572961 | PRJNA1237888_S_NODE_7380_length_162_cov_1.327434_g7330_i0 | PRJNA1237888 | 7380 | 162 | 1.327434 | 2.15044308 | Mus musculus | 10090 | Chordata | Chordata | 300 | 4.36e-77 | NTclustered | gi|120538328|gb|BC129849.1| | 10090 | g7330 | i0 | 100 | 65.2962962962963 | 162 | 0 | 100 | 0 | 1 | 162 | 1294 | 1133 | Mus musculus granulin, mRNA (cDNA clone MGC:150044 IMAGE:40109630), complete cds | blastn | 10578 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24572962 | 24572962 | PRJNA1237888_S_NODE_7440_length_162_cov_0.920354_g7390_i0 | PRJNA1237888 | 7440 | 162 | 0.920354 | 1.49097348 | Alligator mississippiensis | 8496 | Chordata | Chordata | 52.8 | 0.013 | NTclustered | gi|2580381085|ref|XR_002092862.2| | 8496 | g7390 | i0 | 100 | 0.172839506172839 | 28 | 0 | 17 | 0 | 78 | 105 | 1640 | 1667 | PREDICTED: Alligator mississippiensis uncharacterized LOC109285202 (LOC109285202), ncRNA | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Crocodylia | Alligatoridae | Alligator | Alligator mississippiensis | ||
| 24572964 | 24572964 | PRJNA1237888_S_NODE_900_length_419_cov_2.489189_g850_i0 | PRJNA1237888 | 900 | 419 | 2.489189 | 10.42970191 | Mus musculus | 10090 | Chordata | Chordata | 774 | 0 | NTclustered | gi|74140001|dbj|AK153244.1| | 10090 | g850 | i0 | 100 | 95.8663484486873 | 419 | 0 | 100 | 0 | 1 | 419 | 430 | 12 | Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830129D19 product:lysozyme, full insert sequence | blastn | 40168 | 774 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;