RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237888" and tax_phylum = "Candidatus Kapaibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237888 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2897528 2897528 PRJNA1237888_S_NODE_6503_length_166_cov_6.247863_g6453_i0 PRJNA1237888 6503 166 6.247863 10.37145258 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 202 1.2999999999999998e-47   NTclustered gi|2621703255|emb|OY762428.1| 2447898 g6453 i0 88.554 123.042168674699 166 19 100 0 1 166 2681491 2681326 MAG: Candidatus Kapabacteria bacterium isolate a44c304e-2480-4604-92e3-6035b9b042d9 genome assembly, chromosome: 1 blastn 20425 202 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
6724502 6724502 PRJNA1237888_S_NODE_4206_length_200_cov_1.761589_g4156_i0 PRJNA1237888 4206 200 1.761589 3.523178 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 189 1.2699999999999999e-43   NTclustered gi|2556937695|gb|CP129493.1| 2447898 g4156 i0 86.932 14.06 176 14 88 4 25 200 1178773 1178939 MAG: Candidatus Kapaibacterium sp. isolate cMAG.3 chromosome, complete genome blastn 2812 189 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;