RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11824304 11824304 PRJNA1237347_P_NODE_56890_length_975_cov_13.004435_g51570_i0 PRJNA1237347 56890 975 13.004435 126.79324125 Symsagittifera roscoffensis 84072 Xenacoelomorpha other_Eukaryota 224 1.98e-53   NTclustered gi|2701342669|ref|XM_063856379.1| 84072 g51570 i0 72.92 5.00717948717949 709 168 71 23 154 850 822 126 PREDICTED: Symsagittifera roscoffensis serine/threonine-protein phosphatase PP1-beta catalytic subunit (LOC134840522), mRNA blastn 4882 224 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
13093258 13093258 PRJNA1237347_P_NODE_252171_length_372_cov_8.220736_g245598_i0 PRJNA1237347 252171 372 8.220736 30.58113792 Thalassoanaperus singularis 3341620 Xenacoelomorpha other_Eukaryota 93.5 2.08e-14   NTclustered gi|378781004|emb|FR837758.1| 3341620 g245598 i0 91.176 18.4784946236559 68 6 18 0 1 68 2422 2489 Anaperus singularis partial 28S rRNA gene, specimen voucher AWSp-24 blastn 6874 93.5 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Convolutidae Thalassoanaperus Thalassoanaperus singularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;