RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4166210 4166210 PRJNA1237347_P_NODE_230604_length_395_cov_1.183230_g224032_i0 PRJNA1237347 230604 395 1.18323 4.6737585 Thermoplasmata archaeon 1906666 Archaea Archaea 54.7 0.011   NTclustered gi|2107922763|gb|CP070808.1| 1906666 g224032 i0 100 0.0734177215189873 29 0 7 0 242 270 1428936 1428908 MAG: Thermoplasmata archaeon isolate bin1246 chromosome blastn 29 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
7993281 7993281 PRJNA1237347_P_NODE_267767_length_359_cov_1.076923_g261194_i0 PRJNA1237347 267767 359 1.076923 3.86615357 Thermoplasmatales archaeon 2268204 Archaea Archaea 54.7 0.009   NTclustered gi|2108144344|gb|CP070724.1| 2268204 g261194 i0 100 0.158774373259053 29 0 8 0 258 286 1094545 1094573 MAG: Thermoplasmatales archaeon isolate bin45 chromosome blastn 57 54.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales     Thermoplasmatales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;