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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
344735 344735 PRJNA1237347_P_NODE_528061_length_244_cov_0.900585_g521488_i0 PRJNA1237347 528061 244 0.900585 2.1974274 Adineta ricciae 249248 Rotifera other_Eukaryota 307 4.25e-79   NTclustered gi|403492564|gb|JX193021.1| 249248 g521488 i0 92.558 72.5409836065574 215 15 88 1 2 215 1019 805 Adineta ricciae isolate AU.1.2 alpha tubulin gene, partial cds blastn 17700 307 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
1616062 1616062 PRJNA1237347_P_NODE_347862_length_304_cov_1.987013_g341289_i0 PRJNA1237347 347862 304 1.987013 6.04051952 Adineta vaga 104782 Rotifera other_Eukaryota 370 6.89e-98   NTclustered gi|402761787|gb|JX184025.1| 104782 g341289 i0 88.742 0.993421052631579 302 34 99 0 2 303 1 302 Adineta vaga cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 302 370 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2890874 2890874 PRJNA1237347_P_NODE_274363_length_353_cov_1.732143_g267790_i0 PRJNA1237347 274363 353 1.732143 6.11446479 Adineta vaga 104782 Rotifera other_Eukaryota 322 2.3e-83   NTclustered gi|259129963|gb|GQ398061.1| 104782 g267790 i0 83.52 1.01416430594901 358 45 100 11 1 353 4010 3662 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 358 322 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
4172236 4172236 PRJNA1237347_P_NODE_541044_length_243_cov_0.900000_g534471_i0 PRJNA1237347 541044 243 0.9 2.187 Adineta vaga 104782 Rotifera other_Eukaryota 279 9.23e-71   NTclustered gi|403492629|gb|JX193053.1| 104782 g534471 i0 93.194 98.4238683127572 191 11 78 2 1 190 554 743 Adineta vaga isolate BE1C1 alpha tubulin gene, partial cds blastn 23917 279 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
4876919 4876919 PRJNA1237347_P_NODE_419244_length_271_cov_79.010101_g412671_i0 PRJNA1237347 419244 271 79.010101 214.11737371 Metazoa 33208 Rotifera other_Eukaryota 479 9.62e-131   NTclustered gi|37785582|gb|AY210469.1| 96448 g412671 i0 98.524 98.9889298892989 271 4 100 0 1 271 1461 1191 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 26826 479 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
6152340 6152340 PRJNA1237347_P_NODE_567805_length_217_cov_77.305556_g561231_i0 PRJNA1237347 567805 217 77.305556 167.75305652 Metazoa 33208 Rotifera other_Eukaryota 401 1.6499999999999994e-107   NTclustered gi|37785582|gb|AY210469.1| 96448 g561231 i0 100 99.6359447004608 217 0 100 0 1 217 3155 2939 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 21621 401 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
6714334 6714334 PRJNA1237347_P_NODE_117706_length_614_cov_1.085028_g111206_i0 PRJNA1237347 117706 614 1.085028 6.66207192 Habrotrocha constricta 104786 Rotifera other_Eukaryota 758 0   NTclustered gi|402761741|gb|JX184002.1| 104786 g111206 i0 88.925 87.9299674267101 614 68 100 0 1 614 871 1484 Habrotrocha constricta cytochrome c oxidase subunit 1 (COX1) gene, partial cds; mitochondrial blastn 53989 758 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
6723230 6723230 PRJNA1237347_P_NODE_560366_length_236_cov_152.282209_g553793_i0 PRJNA1237347 560366 236 152.282209 359.38601324 Adineta vaga 104782 Rotifera other_Eukaryota 411 3.03e-110   NTclustered gi|72153731|gb|DQ089739.1| 104782 g553793 i0 98.291 59.3432203389831 234 4 99 0 3 236 2613 2380 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 14005 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
9976619 9976619 PRJNA1237347_P_NODE_351088_length_302_cov_85.794760_g344515_i0 PRJNA1237347 351088 302 85.79476 259.1001752 Lecane 96445 Rotifera other_Eukaryota 520 6.409999999999999e-143   NTclustered gi|61200802|gb|AY829083.1| 96446 g344515 i0 97.682 82.9205298013245 302 7 100 0 1 302 2082 1781 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 25042 520 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla
11818014 11818014 PRJNA1237347_P_NODE_239450_length_385_cov_1.560897_g232877_i0 PRJNA1237347 239450 385 1.560897 6.00945345 Habrotrocha constricta 104786 Rotifera other_Eukaryota 241 7.310000000000001e-59   NTclustered gi|402761805|gb|JX184034.1| 104786 g232877 i0 78.421 2.55844155844156 380 74 98 8 9 384 395 20 Habrotrocha constricta NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial blastn 985 241 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Habrotrochidae Habrotrocha Habrotrocha constricta
11819071 11819071 PRJNA1237347_P_NODE_291470_length_340_cov_1.438202_g284897_i0 PRJNA1237347 291470 340 1.438202 4.8898868 Philodina citrina 468664 Rotifera other_Eukaryota 206 2.33e-48   NTclustered gi|407227484|emb|FR856884.1| 468664 g284897 i0 81.25 1.50294117647059 256 46 75 2 6 260 11466 11212 Philodina citrina complete mitochondrial genome blastn 511 206 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
11819426 11819426 PRJNA1237347_P_NODE_310370_length_327_cov_1.212598_g303797_i0 PRJNA1237347 310370 327 1.212598 3.96519546 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 327 4.559999999999999e-85   NTclustered gi|402761777|gb|JX184020.1| 104788 g303797 i0 85.061 5.13761467889908 328 41 99 6 1 324 291 614 Macrotrachela quadricornifera isolate CR cytochrome c oxidase subunit 3 (COX3) gene, complete cds; mitochondrial blastn 1680 327 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
15076012 15076012 PRJNA1237347_P_NODE_347332_length_304_cov_227.389610_g340759_i0 PRJNA1237347 347332 304 227.38961 691.2644144 Adinetidae 104780 Rotifera other_Eukaryota 292 1.53e-74   NTclustered gi|2537903787|gb|KM043252.2| 104782 g340759 i0 100 101.559210526316 158 0 100 0 147 304 708 865 Adineta vaga voucher AD005 18S ribosomal RNA gene, partial sequence blastn 30874 292 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
15648211 15648211 PRJNA1237347_P_NODE_553693_length_241_cov_0.916667_g547120_i0 PRJNA1237347 553693 241 0.916667 2.20916747 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 278 3.29e-70   NTclustered gi|402761793|gb|JX184028.1| 104788 g547120 i0 88.085 0.975103734439834 235 26 97 2 2 235 499 732 Macrotrachela quadricornifera isolate CR cytochrome b (CYTB) gene, complete cds; mitochondrial blastn 235 278 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera
16351694 16351694 PRJNA1237347_P_NODE_49273_length_1064_cov_286.714430_g44384_i0 PRJNA1237347 49273 1064 286.71443 3050.6415352 Eurotatoria 2816136 Rotifera other_Eukaryota 1821 0   NTclustered gi|72153762|gb|DQ089743.1| 231624 g44384 i0 97.484 48.75 1073 16 100 8 1 1064 1153 2223 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 51870 1836 0.991830065359477 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
23293000 23293000 PRJNA1237347_P_NODE_303359_length_331_cov_206.569767_g296786_i0 PRJNA1237347 303359 331 206.569767 683.74592877 Lecane bulla 96446 Rotifera other_Eukaryota 538 1.9599999999999998e-148   NTclustered gi|61200802|gb|AY829083.1| 96446 g296786 i0 95.821 89.5770392749245 335 10 100 3 1 331 1387 1721 Lecane bulla 28S ribosomal RNA gene, partial sequence blastn 29650 538 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae Lecane Lecane bulla

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;