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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 24 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 24 ✖

analysis 1

  • blastn · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
339301 339301 PRJNA1237347_P_NODE_242741_length_381_cov_10.613636_g236168_i0 PRJNA1237347 242741 381 10.613636 40.43795316 Parapharyngiella sp. NVS-2013 1311944 Platyhelminthes Platyhelminthes 135 3.5100000000000004e-27   NTclustered gi|472441117|gb|KC529531.1| 1311944 g236168 i0 80.978 23.7979002624672 184 24 48 8 198 379 1304 1130 Parapharyngiella sp. NVS-2013 isolate UH297.15 28S ribosomal RNA gene, partial sequence blastn 9067 135 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Trigonostomidae Parapharyngiella Parapharyngiella sp. NVS-2013
1615256 1615256 PRJNA1237347_P_NODE_305822_length_330_cov_1.350195_g299249_i0 PRJNA1237347 305822 330 1.350195 4.4556435 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 281 3.6400000000000004e-71   NTclustered gi|10880358|emb|AJ405975.1| 52061 g299249 i0 85.714 92.1969696969697 266 38 81 0 4 269 266 1 Stenostomum leucops partial mitochondrial cytochrome oxidase c subunit I (cox1 gene), part 1 blastn 30425 281 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
2890986 2890986 PRJNA1237347_P_NODE_279763_length_349_cov_1.115942_g273190_i0 PRJNA1237347 279763 349 1.115942 3.89463758 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.033   NTclustered gi|690476617|emb|LN017623.1| 99802 g273190 i0 100 0.0802292263610315 28 0 8 0 18 45 6993 7020 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0017361 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
4173709 4173709 PRJNA1237347_P_NODE_96584_length_696_cov_11.736758_g90239_i0 PRJNA1237347 96584 696 11.736758 81.68783568 Stenostomum leucops 52061 Platyhelminthes Platyhelminthes 436 1.64e-117   NTclustered gi|209968753|gb|FJ384954.1| 52061 g90239 i0 93.266 6.62212643678161 297 18 60 2 103 398 85 380 Stenostomum leucops isolate K05_264 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 4609 436 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum leucops
6721012 6721012 PRJNA1237347_P_NODE_438906_length_263_cov_914.794737_g432333_i0 PRJNA1237347 438906 263 914.794737 2405.91015831 Microstomum lineare 52057 Platyhelminthes Platyhelminthes 180 1.06e-40   NTclustered gi|588313886|gb|KC869844.1| 52057 g432333 i0 92.188 48.4144486692015 128 8 48 2 1 127 2633 2759 Microstomum lineare 28S ribosomal RNA gene, partial sequence blastn 12733 180 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Microstomidae Microstomum Microstomum lineare
6722445 6722445 PRJNA1237347_P_NODE_517266_length_245_cov_2.558140_g510693_i0 PRJNA1237347 517266 245 2.55814 6.267443 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|690668051|emb|LN218513.1| 99802 g510693 i0 100 0.122448979591837 30 0 12 0 1 30 1479 1450 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0181079 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
6723436 6723436 PRJNA1237347_P_NODE_57966_length_963_cov_35.001124_g52601_i0 PRJNA1237347 57966 963 35.001124 337.06082412 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 1432 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g52601 i0 94.618 22.4008307372793 929 42 96 6 2 926 8964 8040 Stenostomum sthenum mitochondrion, complete genome blastn 21572 1432 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
10541999 10541999 PRJNA1237347_P_NODE_180129_length_464_cov_45.918159_g173558_i0 PRJNA1237347 180129 464 45.918159 213.06025776 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 516 1.33e-141   NTclustered gi|68479954|gb|DQ076149.1| 6182 g173558 i0 88.863 0.90948275862069 422 44 91 3 27 446 432 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 422 516 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
11816807 11816807 PRJNA1237347_P_NODE_183090_length_459_cov_102.204663_g176519_i0 PRJNA1237347 183090 459 102.204663 469.11940317 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 732 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g176519 i0 96.811 0.956427015250545 439 13 96 1 19 457 12 449 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 439 732 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
12526095 12526095 PRJNA1237347_P_NODE_144250_length_537_cov_4.200431_g137705_i0 PRJNA1237347 144250 537 4.200431 22.55631447 root 1 Root_unresolved Root_unresolved 54.7 0.015   NTclustered gi|564282264|gb|KF664583.1| 79327 g137705 i0 88.889 0.202979515828678 45 4 8 1 27 70 51 7 Schmidtea mediterranea DNA methyl-transferase mRNA, complete cds blastn 109 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
13096589 13096589 PRJNA1237347_P_NODE_416711_length_273_cov_0.900000_g410138_i0 PRJNA1237347 416711 273 0.9 2.457 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.025   NTclustered gi|2318756023|ref|XM_051213329.1| 6185 g410138 i0 100 0.102564102564103 28 0 10 0 103 130 3396 3423 Schistosoma haematobium Rab interacting lysosomal protein-like 1 (RILPL1_1), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
16915013 16915013 PRJNA1237347_P_NODE_171714_length_479_cov_109.211823_g165144_i0 PRJNA1237347 171714 479 109.211823 523.12463217 Promesostoma cochleare 1311875 Platyhelminthes Platyhelminthes 150 1.61e-31   NTclustered gi|588313926|gb|KC869884.1| 1311875 g165144 i0 79.556 44.8267223382046 225 35 46 9 259 479 2852 3069 Promesostoma cochleare 28S ribosomal RNA gene, partial sequence blastn 21472 150 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Promesostomidae Promesostoma Promesostoma cochleare
18900376 18900376 PRJNA1237347_P_NODE_407035_length_276_cov_5684.394089_g400462_i0 PRJNA1237347 407035 276 5684.394089 15688.92768564 Rhabditophora 147100 Platyhelminthes Platyhelminthes 187 6.669999999999998e-43   NTclustered gi|28273268|gb|AY157156.1| 84079 g400462 i0 89.933 50.5253623188406 149 9 54 5 129 276 2894 2751 Geocentrophora wagini 28S large subunit ribosomal RNA gene, partial sequence blastn 13945 187 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Lecithoepitheliata Prorhynchidae Geocentrophora Geocentrophora wagini
19464409 19464409 PRJNA1237347_P_NODE_194316_length_442_cov_1.317073_g187744_i0 PRJNA1237347 194316 442 1.317073 5.82146266 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 366 1.3399999999999996e-96   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g187744 i0 81.735 0.990950226244344 438 80 99 0 3 440 13108 12671 Stenostomum sthenum mitochondrion, complete genome blastn 438 366 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
19465587 19465587 PRJNA1237347_P_NODE_249196_length_375_cov_2.039735_g242623_i0 PRJNA1237347 249196 375 2.039735 7.64900625 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 339 2.4499999999999999e-88   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g242623 i0 85.152 29.6293333333333 330 49 88 0 46 375 1538 1209 Stenostomum sthenum mitochondrion, complete genome blastn 11111 339 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
19465912 19465912 PRJNA1237347_P_NODE_264056_length_362_cov_1.332180_g257483_i0 PRJNA1237347 264056 362 1.33218 4.8224916 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.034   NTclustered gi|690863799|emb|LN364752.1| 99802 g257483 i0 100 0.0773480662983425 28 0 8 0 291 318 519 492 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0132396 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
19472485 19472485 PRJNA1237347_P_NODE_89976_length_729_cov_3.474085_g83718_i0 PRJNA1237347 89976 729 3.474085 25.32607965 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 817 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g83718 i0 86.933 84.7599451303155 727 95 99 0 1 727 1237 511 Stenostomum sthenum mitochondrion, complete genome blastn 61790 817 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
19472642 19472642 PRJNA1237347_P_NODE_96576_length_696_cov_35.200642_g90232_i0 PRJNA1237347 96576 696 35.200642 244.99646832 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 1125 0   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g90232 i0 96.741 1.93965517241379 675 22 97 0 1 675 2638 1964 Stenostomum sthenum mitochondrion, complete genome blastn 1350 1125 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
21450193 21450193 PRJNA1237347_P_NODE_333357_length_312_cov_24.949791_g326784_i0 PRJNA1237347 333357 312 24.949791 77.84334792 Plagiostomum 84130 Platyhelminthes Platyhelminthes 189 2.13e-43   NTclustered gi|1587089599|gb|MG882058.1| 2544880 g326784 i0 87.879 47.5833333333333 165 14 52 5 1 162 1090 929 Plagiostomum sp. n. MW-2019 isolate XK2 28S ribosomal RNA gene, partial sequence blastn 14846 189 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Prolecithophora Plagiostomidae Plagiostomum Plagiostomum sp. n. MW-2019
21451058 21451058 PRJNA1237347_P_NODE_500677_length_247_cov_469.327586_g494104_i0 PRJNA1237347 500677 247 469.327586 1159.23913742 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 364 2.519999999999999e-96   NTclustered gi|2866376384|gb|PQ722296.1| 39377 g494104 i0 100 97.2064777327935 197 0 99 0 51 247 1546 1350 Stenostomum sp. (in: flatworms) isolate F8 small subunit ribosomal RNA gene, partial sequence blastn 24010 364 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sp. (in: flatworms)
22018186 22018186 PRJNA1237347_P_NODE_343898_length_306_cov_25.866953_g337325_i0 PRJNA1237347 343898 306 25.866953 79.15287618 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 211 4.45e-50   NTclustered gi|68479954|gb|DQ076149.1| 6182 g337325 i0 96.825 0.650326797385621 126 4 65 0 163 288 137 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 199 211 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
23292091 23292091 PRJNA1237347_P_NODE_259799_length_365_cov_76.500000_g253226_i0 PRJNA1237347 259799 365 76.5 279.225 Stylochus zebra 46768 Platyhelminthes Platyhelminthes 58.4 7.45e-4   NTclustered gi|14280070|gb|AF342800.1| 46768 g253226 i0 100 0.0849315068493151 31 0 8 0 262 292 4098 4068 Stylochus zebra internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Polycladida Stylochidae Stylochus Stylochus zebra
23294570 23294570 PRJNA1237347_P_NODE_383179_length_287_cov_1.079439_g376606_i0 PRJNA1237347 383179 287 1.079439 3.09798993 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 289 1.8600000000000003e-73   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g376606 i0 85.017 1 287 40 99 2 3 287 11277 11562 Stenostomum sthenum mitochondrion, complete genome blastn 287 289 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
25274690 25274690 PRJNA1237347_P_NODE_358540_length_298_cov_6.853333_g351967_i0 PRJNA1237347 358540 298 6.853333 20.42293234 Mesocestoides 53467 Platyhelminthes Platyhelminthes 204 7.229999999999999e-48   NTclustered gi|1089667296|dbj|AP017667.1| 53468 g351967 i0 92.308 49.8154362416107 143 11 48 0 145 287 7395 7537 Mesocestoides corti mitochondrial DNA, complete genome blastn 14845 204 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Mesocestoididae Mesocestoides Mesocestoides corti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;