RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16913681 16913681 PRJNA1237347_P_NODE_114854_length_623_cov_15.790909_g108366_i0 PRJNA1237347 114854 623 15.790909 98.37736307 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 254 1.5799999999999999e-62   NTclustered gi|196012823|ref|XM_002116238.1| 10228 g108366 i0 81.848 49.1428571428571 303 53 48 2 135 436 61 362 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_64252), partial mRNA blastn 30616 254 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
20738895 20738895 PRJNA1237347_P_NODE_152517_length_518_cov_2.361798_g145965_i0 PRJNA1237347 152517 518 2.361798 12.23411364 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 60.2 3.03e-4   NTclustered gi|196015675|ref|XM_002117658.1| 10228 g145965 i0 92.857 0.0810810810810811 42 2 8 1 164 204 1573 1532 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_61745), partial mRNA blastn 42 60.2 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;