RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4170259 4170259 PRJNA1237347_P_NODE_435024_length_265_cov_1.604167_g428451_i0 PRJNA1237347 435024 265 1.604167 4.25104255 Minisyncoccota bacterium 2053589 Bacteria Bacteria 217 8.119999999999999e-52   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g428451 i0 82.022 10.0981132075472 267 36 100 9 1 265 444796 444540 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 2676 217 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
19464342 19464342 PRJNA1237347_P_NODE_190996_length_447_cov_1.425134_g184424_i0 PRJNA1237347 190996 447 1.425134 6.37034898 Minisyncoccota bacterium 2053589 Bacteria Bacteria 407 8.019999999999999e-109   NTclustered gi|2556886971|gb|CP129473.1| 2053589 g184424 i0 84.915 180.923937360179 411 53 91 7 4 411 443761 443357 MAG: Candidatus Paceibacterota bacterium isolate cMAG.23 chromosome, complete genome blastn 80873 407 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;