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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
338880 338880 PRJNA1237347_P_NODE_222161_length_404_cov_2.664653_g215589_i0 PRJNA1237347 222161 404 2.664653 10.76519812 Enterocytozoon sp. ex Acetes sibogae australis 2881109 Fungi Fungi 507 6.88e-139   NTclustered gi|2108103202|gb|OK413268.1| 2881109 g215589 i0 89.409 101.091584158416 406 37 100 5 1 404 355 756 Enterocytozoon sp. ex Acetes sibogae australis isolate RA19015_21 small subunit ribosomal RNA gene, partial sequence blastn 40841 507 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon sp. ex Acetes sibogae australis
345349 345349 PRJNA1237347_P_NODE_565021_length_229_cov_2.275641_g558447_i0 PRJNA1237347 565021 229 2.275641 5.21121789 Vairimorpha necatrix 6039 Fungi Fungi 67.6 7.3e-7   NTclustered gi|2735583194|ref|XM_065472807.1| 6039 g558447 i0 84.507 2.63755458515284 71 7 30 3 3 71 523 591 Vairimorpha necatrix Rho-associated protein kinase (VNE69_02253), partial mRNA blastn 604 67.6 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
7998039 7998039 PRJNA1237347_P_NODE_516987_length_245_cov_6.174419_g510414_i0 PRJNA1237347 516987 245 6.174419 15.12732655 Ecytonucleospora nucleophila 1295219 Fungi Fungi 350 7e-92   NTclustered gi|529283990|gb|KF135643.1| 1295219 g510414 i0 92.593 81.8489795918367 243 18 99 0 3 245 4 246 Enterospora nucleophila isolate ENTA2 small subunit ribosomal RNA gene, partial sequence blastn 20053 350 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora nucleophila
10549574 10549574 PRJNA1237347_P_NODE_567449_length_222_cov_4.295302_g560875_i0 PRJNA1237347 567449 222 4.295302 9.53557044 Vairimorpha ceranae 40302 Fungi Fungi 411 2.8199999999999996e-110   NTclustered gi|1372264419|ref|XR_002966747.1| 40302 g560875 i0 100 80.6801801801802 222 0 100 0 1 222 854 1075 Nosema ceranae 23S ribosomal RNA (AAJ76_1700062503), rRNA blastn 17911 411 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
13090401 13090401 PRJNA1237347_P_NODE_121711_length_600_cov_3.313093_g115196_i0 PRJNA1237347 121711 600 3.313093 19.878558 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 342 3.15e-89   NTclustered gi|2522768008|gb|OR162445.1| 646526 g115196 i0 87.542 2.85 297 35 82 2 3 298 2717 3012 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1710 342 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15075924 15075924 PRJNA1237347_P_NODE_33172_length_1346_cov_541.402985_g29394_i0 PRJNA1237347 33172 1346 541.402985 7287.2841781 Fungi 4751 Fungi Fungi 183 4.68e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g29394 i0 95.652 17.2622585438336 115 4 18 1 198 312 5650 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23235 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
15642454 15642454 PRJNA1237347_P_NODE_247873_length_376_cov_5.983498_g241300_i0 PRJNA1237347 247873 376 5.983498 22.49795248 Vairimorpha ceranae 40302 Fungi Fungi 695 0   NTclustered gi|1779934425|dbj|LC510200.1| 40302 g241300 i0 100 100 376 0 100 0 1 376 378 753 Nosema ceranae gene for SSU rRNA, partial sequence, clone: NCS16 blastn 37600 695 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
15642953 15642953 PRJNA1237347_P_NODE_273013_length_354_cov_2.156584_g266440_i0 PRJNA1237347 273013 354 2.156584 7.63430736 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 87.9 9.18e-13   NTclustered gi|448278458|gb|KC137554.1| 1289055 g266440 i0 82.828 0.279661016949153 99 16 28 1 256 354 2854 2951 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 99 87.9 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
15643054 15643054 PRJNA1237347_P_NODE_277573_length_350_cov_6.166065_g271000_i0 PRJNA1237347 277573 350 6.166065 21.5812275 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 291 6.44e-74   NTclustered gi|2522768008|gb|OR162445.1| 646526 g271000 i0 81.972 6.63142857142857 355 52 99 11 3 350 1743 2092 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2321 291 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
16350440 16350440 PRJNA1237347_P_NODE_253433_length_371_cov_2.859060_g246860_i0 PRJNA1237347 253433 371 2.85906 10.6071126 Vairimorpha 6038 Fungi Fungi 686 0   NTclustered gi|1769784452|gb|MN608539.1| 33700 g246860 i0 100 99.9649595687331 371 0 100 0 1 371 1143 773 Vairimorpha sp. clone B5-2 small subunit ribosomal RNA gene, partial sequence blastn 37087 686 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha sp.
16920550 16920550 PRJNA1237347_P_NODE_446094_length_261_cov_1.117021_g439521_i0 PRJNA1237347 446094 261 1.117021 2.91542481 Mitosporidium daphniae 1485682 Fungi Fungi 95.3 3.9e-15   NTclustered gi|2052683922|gb|MW864067.1| 1485682 g439521 i0 85.87 0.789272030651341 92 10 34 2 4 93 5369 5279 Mitosporidium daphniae strain UGP3 mitochondrion, partial genome blastn 206 95.3 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
18191046 18191046 PRJNA1237347_P_NODE_249135_length_375_cov_2.241722_g242562_i0 PRJNA1237347 249135 375 2.241722 8.4064575 Vairimorpha ceranae 40302 Fungi Fungi 675 0   NTclustered gi|68053514|gb|DQ078785.1| 40302 g242562 i0 99.2 78.2826666666667 375 1 99 1 1 373 2553 2927 Nosema ceranae small subunit ribosomal RNA gene, internal transcribed spacer, and large subunit ribosomal RNA gene, complete sequence blastn 29356 675 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
19468154 19468154 PRJNA1237347_P_NODE_377036_length_289_cov_2.129630_g370463_i0 PRJNA1237347 377036 289 2.12963 6.1546307 Vairimorpha ceranae 40302 Fungi Fungi 532 7.84e-147   NTclustered gi|218533565|gb|FJ481911.1| 40302 g370463 i0 100 85.7647058823529 288 0 99 0 1 288 452 739 Nosema ceranae strain C7 large subunit ribosomal RNA gene, partial sequence blastn 24786 532 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
24570978 24570978 PRJNA1237347_P_NODE_524060_length_245_cov_0.895349_g517487_i0 PRJNA1237347 524060 245 0.895349 2.19360505 Vairimorpha ceranae 40302 Fungi Fungi 268 2.02e-67   NTclustered gi|1372266968|ref|XM_024476562.1| 40302 g517487 i0 86.975 10.7918367346939 238 31 100 0 8 245 326 89 Nosema ceranae collagen triple helix repeat-containing protein (AAJ76_870006810), partial mRNA blastn 2644 268 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;