RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1237347 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
343546 343546 PRJNA1237347_P_NODE_461081_length_255_cov_1.269231_g454508_i0 PRJNA1237347 461081 255 1.269231 3.23653905 Ripaglys virus 3130696 Viruses Viruses 183 7.87e-42   NTclustered gi|2717320496|gb|PP172998.1| 3130696 g454508 i0 89.189 79.1058823529412 148 14 58 2 107 253 755 609 MAG: Ripaglys virus isolate KCAP2_k141_358354 genomic sequence blastn 20172 183 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripaglys virus
5441688 5441688 PRJNA1237347_P_NODE_194105_length_442_cov_1.940379_g187533_i0 PRJNA1237347 194105 442 1.940379 8.57647518 Hangzhou mito-like virus 9 3028986 Viruses Viruses 507 7.59e-139   NTclustered gi|2465104871|gb|OQ363045.1| 3028986 g187533 i0 87.5 0.995475113122172 440 53 99 2 1 439 347 785 MAG: Hangzhou mito-like virus 9 isolate gl067 genomic sequence blastn 440 507 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Hangzhou mito-like virus 9
5446963 5446963 PRJNA1237347_P_NODE_457245_length_256_cov_1.710383_g450672_i0 PRJNA1237347 457245 256 1.710383 4.37858048 Chronazanb virus 3129852 Viruses Viruses 147 1.04e-30   NTclustered gi|2717318485|gb|PP172249.1| 3129852 g450672 i0 96.591 41.81640625 88 3 34 0 44 131 4485 4398 MAG: Chronazanb virus isolate CN1B_k141_35798 genomic sequence blastn 10705 147 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazanb virus
24567209 24567209 PRJNA1237347_P_NODE_322440_length_319_cov_1.784553_g315867_i0 PRJNA1237347 322440 319 1.784553 5.69272407 Sopawol virus 3131668 Viruses Viruses 292 1.6199999999999999e-74   NTclustered gi|2717323098|gb|PP173969.1| 3131668 g315867 i0 87.451 259.432601880878 255 30 80 2 66 319 380 127 MAG: Sopawol virus isolate SP1B_k141_158324 genomic sequence blastn 82759 292 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Sopawol virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;