RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10543003 10543003 PRJNA1237347_P_NODE_226309_length_399_cov_163.128834_g219737_i0 PRJNA1237347 226309 399 163.128834 650.88404766 uncultured Cryptomycota 1130064 Fungi Fungi 737 0   NTclustered gi|2086101699|gb|MZ923260.1| 1130064 g219737 i0 100 93.3684210526316 399 0 100 0 1 399 109 507 Uncultured Cryptomycota clone UMPB-227 small subunit ribosomal RNA gene, partial sequence blastn 37254 737 1 Eukaryota Opisthokonta Fungi Cryptomycota         uncultured Cryptomycota
10549601 10549601 PRJNA1237347_P_NODE_569029_length_202_cov_42.062016_g562455_i0 PRJNA1237347 569029 202 42.062016 84.96527232 Rozella sp. 1932610 Fungi Fungi 206 1.28e-48   NTclustered gi|2468791040|gb|OQ702927.1| 1932610 g562455 i0 85.366 101.509900990099 205 23 99 7 2 202 3676 3475 Rozella sp. isolate PSC259 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20505 206 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;