RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6724451 6724451 PRJNA1237347_P_NODE_99106_length_685_cov_3.651961_g92727_i0 PRJNA1237347 99106 685 3.651961 25.01593285 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 806 0   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g92727 i0 87.954 488.442335766423 689 75 100 7 1 685 383694 384378 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 334583 806 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
9270747 9270747 PRJNA1237347_P_NODE_407368_length_276_cov_2.275862_g400795_i0 PRJNA1237347 407368 276 2.275862 6.28137912 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 285 2.3e-72   NTclustered gi|2258874150|gb|CP060230.1| 2052152 g400795 i0 85.455 201.442028985507 275 39 99 1 2 276 383420 383693 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-34 chromosome blastn 55598 285 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
13090570 13090570 PRJNA1237347_P_NODE_129831_length_575_cov_2.231076_g123304_i0 PRJNA1237347 129831 575 2.231076 12.828687 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 464 6.15e-126   NTclustered gi|1958028780|gb|CP064973.1| 2052152 g123304 i0 81.538 12.9026086956522 585 88 100 16 1 575 125571 126145 MAG: Candidatus Nomurabacteria bacterium isolate EsbW_18-Q3-R4-48_MAXAC.200_cln chromosome, complete genome blastn 7419 464 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;