RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Kaiseribacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6721088 6721088 PRJNA1237347_P_NODE_442846_length_262_cov_1.396825_g436273_i0 PRJNA1237347 442846 262 1.396825 3.6596815 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 54.7 0.007   NTclustered gi|1950807631|gb|CP066682.1| 2030810 g436273 i0 100 0.217557251908397 29 0 11 0 205 233 672501 672473 MAG: Candidatus Kaiserbacteria bacterium isolate NC_groundwater_79_Ag_B-0.1um_58_26 chromosome blastn 57 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
15642959 15642959 PRJNA1237347_P_NODE_273313_length_354_cov_1.608541_g266740_i0 PRJNA1237347 273313 354 1.608541 5.69423514 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 276 1.83e-69   NTclustered gi|1995742126|gb|CP070993.1| 2030810 g266740 i0 81.18 6.81073446327684 356 55 99 10 1 350 403793 403444 MAG: Candidatus Kaiserbacteria bacterium isolate FR12parc1 chromosome, complete genome blastn 2411 276 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
23294758 23294758 PRJNA1237347_P_NODE_394279_length_282_cov_1.425837_g387706_i0 PRJNA1237347 394279 282 1.425837 4.02086034 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 213 1.13e-50   NTclustered gi|2874253687|emb|OY969413.1| 2030810 g387706 i0 81.159 52.8723404255319 276 42 96 9 10 281 886197 885928 MAG: Candidatus Kaiserbacteria bacterium isolate MFD01223.bin.1.23 genome assembly, chromosome: 1 blastn 14910 213 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;