RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Candidatus Eiseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1237347 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4172598 4172598 PRJNA1237347_P_NODE_561864_length_234_cov_2.757764_g555290_i0 PRJNA1237347 561864 234 2.757764 6.45316776 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 263 8.89e-66   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g555290 i0 86.92 94.9957264957265 237 27 100 4 1 234 4159186 4159421 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 22229 263 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
7991911 7991911 PRJNA1237347_P_NODE_200127_length_433_cov_2.263889_g193555_i0 PRJNA1237347 200127 433 2.263889 9.80263937 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 60.2 2.5e-4   NTclustered gi|2108210926|gb|CP070702.1| 2212470 g193555 i0 97.143 0.173210161662818 35 1 8 0 391 425 1621140 1621106 MAG: Candidatus Eiseniibacteriota bacterium isolate bin56 chromosome blastn 75 60.2 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
16918650 16918650 PRJNA1237347_P_NODE_351574_length_302_cov_1.978166_g345001_i0 PRJNA1237347 351574 302 1.978166 5.97406132 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 503 6.459999999999998e-138   NTclustered gi|2874254017|emb|OY970342.1| 2212470 g345001 i0 96.689 203.023178807947 302 10 100 0 1 302 4159089 4158788 MAG: Candidatus Eisenbacteria bacterium isolate MFD02242.bin.c.1 genome assembly, chromosome: 1 blastn 61313 503 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;