RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1237347 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7995527 7995527 PRJNA1237347_P_NODE_384027_length_286_cov_2.159624_g377454_i0 PRJNA1237347 384027 286 2.159624 6.17652464 Paludicella articulata 569425 Bryozoa other_Eukaryota 60.2 1.58e-4   NTclustered gi|2587622415|gb|OR625502.1| 569425 g377454 i0 85.965 6.33916083916084 57 7 20 1 86 141 4035 3979 Paludicella articulata strain VIBE2 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1813 60.2 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Ctenostomatida Paludicellidae Paludicella Paludicella articulata
12526675 12526675 PRJNA1237347_P_NODE_266830_length_359_cov_4.958042_g260257_i0 PRJNA1237347 266830 359 4.958042 17.79937078 Thalamoporellidae 97292 Bryozoa other_Eukaryota 97.1 1.55e-15   NTclustered gi|2075442530|gb|MZ677793.1| 2865220 g260257 i0 77.273 27.1532033426184 176 32 49 4 1 175 3538 3706 Thalamoporella sp. BLEED1037 large subunit ribosomal RNA gene, partial sequence blastn 9748 97.1 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Thalamoporellidae Thalamoporella Thalamoporella sp. BLEED1037
16915362 16915362 PRJNA1237347_P_NODE_188014_length_451_cov_6.169312_g181442_i0 PRJNA1237347 188014 451 6.169312 27.82359712 Steginoporella haddoni 2865435 Bryozoa other_Eukaryota 63.9 2.02e-5   NTclustered gi|2075442463|gb|MZ677754.1| 2865435 g181442 i0 95 3.80931263858093 40 2 9 0 257 296 3586 3547 Steginoporella haddoni voucher BLEED1763 large subunit ribosomal RNA gene, partial sequence blastn 1718 63.9 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Steginoporellidae Steginoporella Steginoporella haddoni
20737750 20737750 PRJNA1237347_P_NODE_102977_length_668_cov_27.157983_g96559_i0 PRJNA1237347 102977 668 27.157983 181.41532644 Membranipora membranacea 95170 Bryozoa other_Eukaryota 492 3.31e-134   NTclustered gi|2320635325|gb|ON868447.1| 95170 g96559 i0 86.154 66.5434131736527 455 63 68 0 112 566 18 472 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 44451 492 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;