contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2892160 | 2892160 | PRJNA1237347_P_NODE_340443_length_308_cov_6.408511_g333870_i0 | PRJNA1237347 | 340443 | 308 | 6.408511 | 19.73821388 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 206 | 2.09e-48 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g333870 | i0 | 83.475 | 9.1461038961039 | 236 | 24 | 74 | 10 | 80 | 308 | 2045242 | 2045015 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 2817 | 206 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 7426599 | 7426599 | PRJNA1237347_P_NODE_391006_length_283_cov_2.180952_g384433_i0 | PRJNA1237347 | 391006 | 283 | 2.180952 | 6.17209416 | Chthonomonas | 1077265 | Bacteria | Bacteria | 259 | 1.43e-64 | NTclustered | gi|526641997|ref|NR_103994.1| | 454171 | g384433 | i0 | 85.657 | 138.3074204947 | 251 | 31 | 87 | 4 | 10 | 255 | 11 | 261 | Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence | blastn | 39141 | 259 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonas | Chthonomonas calidirosea | ||
| 13094410 | 13094410 | PRJNA1237347_P_NODE_308111_length_328_cov_2.682353_g301538_i0 | PRJNA1237347 | 308111 | 328 | 2.682353 | 8.79811784 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 224 | 6.179999999999998e-54 | NTclustered | gi|2076449834|gb|CP075365.1| | 2682144 | g301538 | i0 | 79.385 | 3.84756097560976 | 325 | 62 | 98 | 5 | 6 | 327 | 787720 | 787398 | MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome | blastn | 1262 | 224 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 14369674 | 14369674 | PRJNA1237347_P_NODE_305532_length_330_cov_1.727626_g298959_i0 | PRJNA1237347 | 305532 | 330 | 1.727626 | 5.7011658 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 121 | 8.4e-23 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g298959 | i0 | 83.333 | 2.5 | 132 | 21 | 43 | 1 | 106 | 237 | 1480546 | 1480416 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 825 | 121 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 15644108 | 15644108 | PRJNA1237347_P_NODE_331733_length_313_cov_13.054167_g325160_i0 | PRJNA1237347 | 331733 | 313 | 13.054167 | 40.85954271 | Fimbriimonas ginsengisoli | 1005039 | Bacteria | Bacteria | 121 | 7.91e-23 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g325160 | i0 | 84.677 | 0.396166134185303 | 124 | 16 | 39 | 3 | 1 | 122 | 1625879 | 1625757 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 124 | 121 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 15644507 | 15644507 | PRJNA1237347_P_NODE_352933_length_301_cov_36.228070_g346360_i0 | PRJNA1237347 | 352933 | 301 | 36.22807 | 109.0464907 | Fimbriimonadaceae bacterium | 2682144 | Bacteria | Bacteria | 364 | 3.169999999999999e-96 | NTclustered | gi|2076449834|gb|CP075365.1| | 2682144 | g346360 | i0 | 88.889 | 417.1926910299 | 297 | 32 | 99 | 1 | 4 | 300 | 1879368 | 1879663 | MAG: Fimbriimonadaceae bacterium isolate ACE_ARM2 chromosome | blastn | 125575 | 364 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonadaceae bacterium | |||
| 16922090 | 16922090 | PRJNA1237347_P_NODE_531214_length_244_cov_0.900585_g524641_i0 | PRJNA1237347 | 531214 | 244 | 0.900585 | 2.1974274 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2874253689|emb|OY969415.1| | 157466 | g524641 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 164 | 191 | 1240959 | 1240986 | MAG: uncultured Armatimonadetes bacterium isolate MFD00905.bin.2.19 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 17626497 | 17626497 | PRJNA1237347_P_NODE_407094_length_276_cov_4.246305_g400521_i0 | PRJNA1237347 | 407094 | 276 | 4.246305 | 11.7198018 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 122 | 1.9099999999999998e-23 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g400521 | i0 | 75.088 | 1.94927536231884 | 285 | 59 | 100 | 10 | 1 | 276 | 1625558 | 1625839 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 538 | 122 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 18900434 | 18900434 | PRJNA1237347_P_NODE_419255_length_271_cov_10.767677_g412682_i0 | PRJNA1237347 | 419255 | 271 | 10.767677 | 29.18040467 | Armatimonadota | 67819 | Bacteria | Bacteria | 337 | 6.129999999999998e-88 | NTclustered | gi|1996217993|dbj|AP021858.1| | 2608984 | g412682 | i0 | 91.165 | 201.206642066421 | 249 | 20 | 92 | 2 | 20 | 267 | 37378 | 37131 | Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome | blastn | 54527 | 337 | 1 | Bacteria | Bacillati | Armatimonadota | Candidatus Nitrosymbiomonas | Candidatus Nitrosymbiomonas proteolyticus | |||||
| 22725612 | 22725612 | PRJNA1237347_P_NODE_385598_length_286_cov_1.084507_g379025_i0 | PRJNA1237347 | 385598 | 286 | 1.084507 | 3.10169002 | Chthonomonas | 1077265 | Bacteria | Bacteria | 182 | 3.23e-41 | NTclustered | gi|526641997|ref|NR_103994.1| | 454171 | g379025 | i0 | 87.037 | 98.5384615384615 | 162 | 19 | 56 | 2 | 91 | 251 | 1541 | 1701 | Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence | blastn | 28182 | 182 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonas | Chthonomonas calidirosea | ||
| 22725770 | 22725770 | PRJNA1237347_P_NODE_416898_length_272_cov_3.095477_g410325_i0 | PRJNA1237347 | 416898 | 272 | 3.095477 | 8.41969744 | Chthonomonas | 1077265 | Bacteria | Bacteria | 337 | 6.15e-88 | NTclustered | gi|526641997|ref|NR_103994.1| | 454171 | g410325 | i0 | 89.259 | 228.981617647059 | 270 | 28 | 99 | 1 | 1 | 270 | 1925 | 2193 | Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence | blastn | 62283 | 337 | 1 | Bacteria | Bacillati | Armatimonadota | Chthonomonadia | Chthonomonadales | Chthonomonadaceae | Chthonomonas | Chthonomonas calidirosea | ||
| 22726192 | 22726192 | PRJNA1237347_P_NODE_503058_length_247_cov_1.321839_g496485_i0 | PRJNA1237347 | 503058 | 247 | 1.321839 | 3.26494233 | Armatimonadota | 67819 | Bacteria | Bacteria | 106 | 1.69e-18 | NTclustered | gi|1996217993|dbj|AP021858.1| | 2608984 | g496485 | i0 | 85.294 | 1.23886639676113 | 102 | 15 | 41 | 0 | 9 | 110 | 2493228 | 2493329 | Candidatus Nitrosymbiomonas proteolyticus DNA, complete genome | blastn | 306 | 106 | 1 | Bacteria | Bacillati | Armatimonadota | Candidatus Nitrosymbiomonas | Candidatus Nitrosymbiomonas proteolyticus | |||||
| 24569495 | 24569495 | PRJNA1237347_P_NODE_440560_length_263_cov_1.315789_g433987_i0 | PRJNA1237347 | 440560 | 263 | 1.315789 | 3.46052507 | Fimbriimonas sp. | 1936159 | Bacteria | Bacteria | 117 | 8.39e-22 | NTclustered | gi|2778022393|emb|OZ123194.1| | 1936159 | g433987 | i0 | 87.255 | 1.79847908745247 | 102 | 13 | 39 | 0 | 70 | 171 | 2377920 | 2378021 | MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 | blastn | 473 | 117 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;