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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_clade = "delta/epsilon subdivisions"

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tax_superkingdom 1

tax_clade 1

  • delta/epsilon subdivisions · 10 ✖

bioproject 1

  • PRJNA1237347 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4172163 4172163 PRJNA1237347_P_NODE_536924_length_243_cov_0.905882_g530351_i0 PRJNA1237347 536924 243 0.905882 2.20129326 uncultured delta proteobacterium 34034 Bacteria Bacteria 219 2.0399999999999998e-52   NTclustered gi|2874254016|emb|OY970341.1| 34034 g530351 i0 84.615 3.11111111111111 221 32 91 2 23 242 236397 236616 MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 blastn 756 219 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
4173230 4173230 PRJNA1237347_P_NODE_77244_length_804_cov_3.708618_g71210_i0 PRJNA1237347 77244 804 3.708618 29.81728872 Microvenator marinus 2600177 Bacteria Bacteria 841 0   NTclustered gi|1722470586|gb|CP042467.1| 2600177 g71210 i0 86.111 202.725124378109 792 96 98 13 1 785 703812 703028 Microvenator marinus strain V1718 chromosome, complete genome blastn 162991 841 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
6150455 6150455 PRJNA1237347_P_NODE_193585_length_443_cov_1.613514_g187013_i0 PRJNA1237347 193585 443 1.613514 7.14786702 Thermodesulfobacteriota 200940 Bacteria Bacteria 383 1.3399999999999998e-101   NTclustered gi|1722470586|gb|CP042467.1| 2600177 g187013 i0 82.483 188.79006772009 451 66 100 13 1 443 702476 702031 Microvenator marinus strain V1718 chromosome, complete genome blastn 83634 383 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria Bradymonadales Microvenatoraceae Microvenator Microvenator marinus
6723929 6723929 PRJNA1237347_P_NODE_77526_length_802_cov_4.746228_g71480_i0 PRJNA1237347 77526 802 4.746228 38.06474856 uncultured delta proteobacterium 34034 Bacteria Bacteria 957 0   NTclustered gi|374854163|dbj|AP011765.1| 34034 g71480 i0 88.323 152.931421446384 805 85 100 8 1 802 13467 12669 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 122651 957 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
7993850 7993850 PRJNA1237347_P_NODE_295487_length_337_cov_1.583333_g288914_i0 PRJNA1237347 295487 337 1.583333 5.33583221 uncultured delta proteobacterium 34034 Bacteria Bacteria 518 2.6099999999999998e-142   NTclustered gi|451917584|gb|KC451448.1| 34034 g288914 i0 95.122 96.2017804154303 328 16 97 0 10 337 1 328 Uncultured delta proteobacterium clone RLBp5787 16S ribosomal RNA gene, partial sequence blastn 32420 518 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
11816321 11816321 PRJNA1237347_P_NODE_161570_length_499_cov_1.561033_g155009_i0 PRJNA1237347 161570 499 1.561033 7.78955467 uncultured delta proteobacterium 34034 Bacteria Bacteria 52.8 0.049   NTclustered gi|2874253888|emb|OY970063.1| 34034 g155009 i0 100 0.0561122244488978 28 0 6 0 210 237 1130402 1130375 MAG: uncultured delta proteobacterium isolate MFD10007.bin.1.119 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
13091309 13091309 PRJNA1237347_P_NODE_159751_length_502_cov_12.100233_g153190_i0 PRJNA1237347 159751 502 12.100233 60.74316966 uncultured delta proteobacterium 34034 Bacteria Bacteria 789 0   NTclustered gi|374854163|dbj|AP011765.1| 34034 g153190 i0 95.02 173.5 502 25 100 0 1 502 14653 14152 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 87097 789 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
18191989 18191989 PRJNA1237347_P_NODE_296055_length_337_cov_1.090909_g289482_i0 PRJNA1237347 296055 337 1.090909 3.67636333 uncultured delta proteobacterium 34034 Bacteria Bacteria 222 2.29e-53   NTclustered gi|374854163|dbj|AP011765.1| 34034 g289482 i0 79.612 9.19881305637982 309 63 92 0 8 316 3168 3476 Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 blastn 3100 222 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
20747035 20747035 PRJNA1237347_P_NODE_567677_length_219_cov_5.452055_g561103_i0 PRJNA1237347 567677 219 5.452055 11.94000045 uncultured delta proteobacterium 34034 Bacteria Bacteria 93.5 1.14e-14   NTclustered gi|2874253659|emb|OY969087.1| 34034 g561103 i0 86.747 15.6712328767123 83 11 38 0 46 128 3055992 3055910 MAG: uncultured delta proteobacterium isolate MFD01721.bin.c.1 genome assembly, chromosome: 1 blastn 3432 93.5 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium
23293488 23293488 PRJNA1237347_P_NODE_327999_length_316_cov_1.259259_g321426_i0 PRJNA1237347 327999 316 1.259259 3.97925844 uncultured delta proteobacterium 34034 Bacteria Bacteria 383 9.24e-102   NTclustered gi|2874253999|emb|OY970324.1| 34034 g321426 i0 88.608 156.401898734177 316 34 99 2 2 316 82812 83126 MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 blastn 49423 383 1 Bacteria delta/epsilon subdivisions     Deltaproteobacteria       uncultured delta proteobacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;