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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1237347" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 12 ✖

bioproject 1

  • PRJNA1237347 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2893853 2893853 PRJNA1237347_P_NODE_43183_length_1154_cov_3.436633_g38652_i0 PRJNA1237347 43183 1154 3.436633 39.65874482 Podomonas capensis 2925399 Root_unresolved Root_unresolved 174 2.41e-38   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g38652 i0 82.039 18.2729636048527 206 35 18 2 393 598 3908 3705 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21087 174 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
5445780 5445780 PRJNA1237347_P_NODE_395125_length_282_cov_0.971292_g388552_i0 PRJNA1237347 395125 282 0.971292 2.73904344 Amastigomonas marina 234594 Root_unresolved Root_unresolved 165 3.1999999999999995e-36   NTclustered gi|31982973|gb|AY236711.1| 234594 g388552 i0 82.703 26.3971631205674 185 32 66 0 90 274 536 352 Amastigomonas marina heat shock protein 90 (Hsp90) gene, partial cds blastn 7444 165 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Amastigomonas Amastigomonas marina
7995562 7995562 PRJNA1237347_P_NODE_385967_length_285_cov_18.320755_g379394_i0 PRJNA1237347 385967 285 18.320755 52.21415175 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 527 3.59e-145   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g379394 i0 100 79.9719298245614 285 0 100 0 1 285 4123 3839 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22792 527 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
14371037 14371037 PRJNA1237347_P_NODE_37572_length_1253_cov_2.754237_g33491_i0 PRJNA1237347 37572 1253 2.754237 34.51058961 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 7.65e-4   NTclustered gi|923135816|ref|XM_013905920.1| 461836 g33491 i0 90.909 0.0837988826815642 44 4 4 0 731 774 1415 1372 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_01870), partial mRNA blastn 105 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
15644137 15644137 PRJNA1237347_P_NODE_333353_length_312_cov_67.104603_g326780_i0 PRJNA1237347 333353 312 67.104603 209.36636136 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 577 3.89e-160   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g326780 i0 100 101.342948717949 312 0 100 0 1 312 396 85 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 31619 577 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
15645036 15645036 PRJNA1237347_P_NODE_381333_length_287_cov_5.266355_g374760_i0 PRJNA1237347 381333 287 5.266355 15.11443885 Mylnikovia oxoniensis 1314681 Root_unresolved Root_unresolved 313 1.1e-80   NTclustered gi|2206682162|gb|OM966635.1| 1314681 g374760 i0 88.258 94.390243902439 264 27 92 3 24 287 3549 3808 Mylnikovia oxoniensis strain CCAP19012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27090 313 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Mylnikovia Mylnikovia oxoniensis
17627381 17627381 PRJNA1237347_P_NODE_64754_length_899_cov_4.044794_g59112_i0 PRJNA1237347 64754 899 4.0447939999999996 36.36269806 root 1 Root_unresolved Root_unresolved 281 1.06e-70   NTclustered gi|761380055|ref|NC_026452.1| 529818 g59112 i0 77.018 54.6195773081201 570 81 62 32 292 847 284 817 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 49103 281 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
19471628 19471628 PRJNA1237347_P_NODE_566456_length_226_cov_3.392157_g559882_i0 PRJNA1237347 566456 226 3.392157 7.66627482 Thecamonas trahens 529818 Root_unresolved Root_unresolved 158 4.14e-34   NTclustered gi|761380055|ref|NC_026452.1| 529818 g559882 i0 79.654 102.933628318584 231 38 98 5 4 225 2102 2332 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 23263 158 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
20743692 20743692 PRJNA1237347_P_NODE_385977_length_285_cov_9.750000_g379404_i0 PRJNA1237347 385977 285 9.75 27.7875 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 527 3.59e-145   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g379404 i0 100 97.5824561403509 285 0 100 0 1 285 1656 1372 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27811 527 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
22015151 22015151 PRJNA1237347_P_NODE_197138_length_437_cov_42.686813_g190566_i0 PRJNA1237347 197138 437 42.686813 186.54137281 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 808 0   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g190566 i0 100 82.812356979405 437 0 100 0 1 437 724 1160 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36189 808 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
23288888 23288888 PRJNA1237347_P_NODE_115659_length_620_cov_90.367459_g109170_i0 PRJNA1237347 115659 620 90.367459 560.2782458 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 145 9.86e-30   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g109170 i0 88.889 18.6403225806452 117 13 19 0 172 288 5294 5178 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11557 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
23297977 23297977 PRJNA1237347_P_NODE_568059_length_214_cov_652.163121_g561485_i0 PRJNA1237347 568059 214 652.163121 1395.62907894 Mylnikovia oxoniensis 1314681 Root_unresolved Root_unresolved 226 1.0499999999999999e-54   NTclustered gi|2206682162|gb|OM966635.1| 1314681 g561485 i0 88 92.9252336448598 200 12 93 9 17 214 3704 3515 Mylnikovia oxoniensis strain CCAP19012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19886 226 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Mylnikovia Mylnikovia oxoniensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;