RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1233465" and tax_phylum = "Phoronida"

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tax_superkingdom 1

tax_phylum 1

  • Phoronida · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25669806 25669806 PRJNA1233465a_S_NODE_240402_length_163_cov_0.859649_g239128_i0 PRJNA1233465 240402 163 0.859649 1.40122787 Phoronis muelleri 478209 Phoronida other_Eukaryota 62.1 2.26e-5   NTclustered gi|188572533|gb|EU558370.1| 478209 g239128 i0 80.488 0.503067484662577 82 14 50 2 53 133 312 232 Phoronis muelleri putative 60S ribosomal protein RPL23 mRNA, complete cds blastn 82 62.1 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri
25947009 25947009 PRJNA1233465b_S_NODE_286668_length_179_cov_0.753846_g284983_i0 PRJNA1233465 286668 179 0.753846 1.34938434 Phoronis muelleri 478209 Phoronida other_Eukaryota 104 4.13e-18   NTclustered gi|188572533|gb|EU558370.1| 478209 g284983 i0 82.787 0.681564245810056 122 16 66 5 59 177 317 198 Phoronis muelleri putative 60S ribosomal protein RPL23 mRNA, complete cds blastn 122 104 1 Eukaryota Opisthokonta Metazoa Phoronida     Phoronidae Phoronis Phoronis muelleri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;