RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1233465" and tax_phylum = "Nematomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Nematomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26231011 26231011 PRJNA1233465e_S_NODE_7998_length_550_cov_9.934132_g6805_i0 PRJNA1233465 7998 550 9.934132 54.637726 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 54.7 0.015   NTclustered gi|2733959944|ref|XM_065464400.1| 3053472 g6805 i0 100 0.0527272727272727 29 0 5 0 54 82 1933 1905 PREDICTED: Gordionus sp. m RMFG-2023 probable serine/threonine-protein kinase clkA (LOC135928068), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023
26484962 26484962 PRJNA1233465a_S_NODE_178432_length_182_cov_1.150376_g177158_i0 PRJNA1233465 178432 182 1.150376 2.09368432 Gordionus sp. m RMFG-2 3053472 Nematomorpha other_Eukaryota 54.7 0.004   NTclustered gi|2733949533|ref|XM_065459315.1| 3053472 g177158 i0 100 0.159340659340659 29 0 16 0 131 159 1430 1402 PREDICTED: Gordionus sp. m RMFG-2023 large neutral amino acids transporter small subunit 1-like (LOC135924260), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Nematomorpha Gordioida Chordodea Parachordodidae Gordionus Gordionus sp. m RMFG-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;