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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA1233465" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 14 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1233465 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25557997 25557997 PRJNA1233465f_S_NODE_259801_length_162_cov_1.557522_g257521_i0 PRJNA1233465 259801 162 1.557522 2.52318564 Patiria pectinifera 7594 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|343175108|gb|JN375541.1| 7594 g257521 i0 96.875 0.197530864197531 32 1 20 0 70 101 1426 1395 Patiria pectinifera cathepsin X (CtX) mRNA, complete cds blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria pectinifera
25622805 25622805 PRJNA1233465f_S_NODE_130985_length_212_cov_3.355828_g128705_i0 PRJNA1233465 130985 212 3.355828 7.11435536 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.019   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g128705 i0 100 0.264150943396226 28 0 13 0 84 111 3089 3062 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
25687534 25687534 PRJNA1233465f_S_NODE_108170_length_231_cov_1.478022_g105890_i0 PRJNA1233465 108170 231 1.478022 3.4142308200000002 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 54.7 0.006   NTclustered gi|2037971935|ref|XM_041598236.1| 7654 g105890 i0 100 0.251082251082251 29 0 13 0 8 36 1301 1273 PREDICTED: Lytechinus variegatus mitochondrial import inner membrane translocase subunit Tim21-like (LOC121407259), transcript variant X1, mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
25691775 25691775 PRJNA1233465f_S_NODE_203698_length_176_cov_3.464567_g201418_i0 PRJNA1233465 203698 176 3.464567 6.09763792 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.015   NTclustered gi|1040842650|gb|KU512189.1| 46514 g201418 i0 100 0.159090909090909 28 0 16 0 55 82 65 38 Patiria miniata isolate c35673_g1_i1 Plk4 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
25755946 25755946 PRJNA1233465b_S_NODE_143906_length_239_cov_20.763158_g142221_i0 PRJNA1233465 143906 239 20.763158 49.62394762 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.021   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g142221 i0 100 0.234309623430962 28 0 12 0 91 118 3089 3062 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
25891311 25891311 PRJNA1233465a_S_NODE_86123_length_242_cov_17.388601_g84849_i0 PRJNA1233465 86123 242 17.388601 42.08041442 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.022   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g84849 i0 100 0.231404958677686 28 0 12 0 126 153 3062 3089 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
26026910 26026910 PRJNA1233465a_S_NODE_210012_length_170_cov_0.842975_g208738_i0 PRJNA1233465 210012 170 0.842975 1.4330575 Echinoidea 7625 Echinodermata other_Eukaryota 54.7 0.004   NTclustered gi|1125813433|ref|NC_032365.1| 31907 g208738 i0 92.105 0.564705882352941 38 3 22 0 1 38 4929 4892 Glyptocidaris crenularis mitochondrion, complete genome blastn 96 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Phymosomatoida Phymosomatidae Glyptocidaris Glyptocidaris crenularis
26030170 26030170 PRJNA1233465e_S_NODE_103268_length_190_cov_1.730496_g101958_i0 PRJNA1233465 103268 190 1.730496 3.2879424 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.016   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g101958 i0 100 0.294736842105263 28 0 15 0 81 108 3062 3089 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
26221430 26221430 PRJNA1233465d_S_NODE_100110_length_182_cov_2.315789_g98999_i0 PRJNA1233465 100110 182 2.315789 4.21473598 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.015   NTclustered gi|1040842650|gb|KU512189.1| 46514 g98999 i0 100 0.153846153846154 28 0 15 0 55 82 65 38 Patiria miniata isolate c35673_g1_i1 Plk4 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
26352680 26352680 PRJNA1233465b_S_NODE_110279_length_265_cov_4.143519_g108594_i0 PRJNA1233465 110279 265 4.143519 10.98032535 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.024   NTclustered gi|1752383177|ref|XM_030994723.1| 7668 g108594 i0 100 0.105660377358491 28 0 11 0 136 163 2205 2232 PREDICTED: Strongylocentrotus purpuratus trophoblast glycoprotein (LOC100890978), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
26362941 26362941 PRJNA1233465e_S_NODE_124599_length_176_cov_1.763780_g123289_i0 PRJNA1233465 124599 176 1.76378 3.1042528 Patiria miniata 46514 Echinodermata other_Eukaryota 52.8 0.015   NTclustered gi|1040842650|gb|KU512189.1| 46514 g123289 i0 100 0.159090909090909 28 0 16 0 55 82 65 38 Patiria miniata isolate c35673_g1_i1 Plk4 mRNA, complete cds blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
26436974 26436974 PRJNA1233465b_S_NODE_380503_length_156_cov_12.626168_g378818_i0 PRJNA1233465 380503 156 12.626168 19.69682208 Metazoa 33208 Echinodermata other_Eukaryota 52.8 0.013   NTclustered gi|1752354527|ref|XM_030982582.1| 7668 g378818 i0 100 0.583333333333333 28 0 18 0 4 31 440 413 PREDICTED: Strongylocentrotus purpuratus probable E3 ubiquitin-protein ligase HERC6 (LOC115922850), mRNA blastn 91 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
26489324 26489324 PRJNA1233465b_S_NODE_139632_length_242_cov_4.782383_g137947_i0 PRJNA1233465 139632 242 4.782383 11.57336686 Asterias rubens 7604 Echinodermata other_Eukaryota 58.4 4.69e-4   NTclustered gi|1834286521|ref|XM_033768550.1| 7604 g137947 i0 94.595 0.45867768595041303 37 2 15 0 206 242 1137 1173 PREDICTED: Asterias rubens mitochondrial coenzyme A transporter SLC25A42-like (LOC117287919), transcript variant X3, mRNA blastn 111 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
26510869 26510869 PRJNA1233465f_S_NODE_263544_length_162_cov_0.884956_g261264_i0 PRJNA1233465 263544 162 0.884956 1.43362872 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 52.8 0.013   NTclustered gi|1752353583|ref|XM_011682767.2| 7668 g261264 i0 100 0.345679012345679 28 0 17 0 71 98 7767 7740 PREDICTED: Strongylocentrotus purpuratus multidrug resistance-associated protein 4 (LOC591982), transcript variant X1, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;