contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA1233465" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25673428 | 25673428 | PRJNA1233465b_S_NODE_191242_length_213_cov_1.865854_g189557_i0 | PRJNA1233465 | 191242 | 213 | 1.865854 | 3.97426902 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 63.9 | 8.66e-6 | NTclustered | gi|2874253688|emb|OY969414.1| | 174324 | g189557 | i0 | 89.796 | 1.69953051643192 | 49 | 5 | 23 | 0 | 133 | 181 | 1887191 | 1887143 | MAG: uncultured Chlamydiales bacterium isolate MFD04463.bin.c.14 genome assembly, chromosome: 1 | blastn | 362 | 63.9 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 25692028 | 25692028 | PRJNA1233465f_S_NODE_210250_length_174_cov_1.616000_g207970_i0 | PRJNA1233465 | 210250 | 174 | 1.616 | 2.81184 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 224 | 2.93e-54 | NTclustered | gi|2874253712|emb|OY969554.1| | 174324 | g207970 | i0 | 90.964 | 2.68390804597701 | 166 | 15 | 95 | 0 | 4 | 169 | 172359 | 172194 | MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 | blastn | 467 | 224 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 25696437 | 25696437 | PRJNA1233465f_S_NODE_70378_length_277_cov_2.197368_g68098_i0 | PRJNA1233465 | 70378 | 277 | 2.197368 | 6.08670936 | Criblamydia sequanensis CRIB-18 | 1437425 | Bacteria | Bacteria | 300 | 8.24e-77 | NTclustered | gi|678241437|emb|LK031773.1| | 1437425 | g68098 | i0 | 98.246 | 1.23465703971119 | 171 | 3 | 62 | 0 | 107 | 277 | 21870 | 22040 | Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence | blastn | 342 | 300 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 25814494 | 25814494 | PRJNA1233465d_S_NODE_139371_length_163_cov_0.868421_g138260_i0 | PRJNA1233465 | 139371 | 163 | 0.868421 | 1.41552623 | Criblamydia sequanensis CRIB-18 | 1437425 | Bacteria | Bacteria | 268 | 1.24e-67 | NTclustered | gi|678241437|emb|LK031773.1| | 1437425 | g138260 | i0 | 96.319 | 2 | 163 | 6 | 100 | 0 | 1 | 163 | 22166 | 22004 | Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence | blastn | 326 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 25818689 | 25818689 | PRJNA1233465e_S_NODE_121675_length_178_cov_1.186047_g120365_i0 | PRJNA1233465 | 121675 | 178 | 1.186047 | 2.11116366 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 163 | 6.67e-36 | NTclustered | gi|2874253676|emb|OY969110.1| | 305355 | g120365 | i0 | 95.192 | 9.66292134831461 | 104 | 4 | 58 | 1 | 1 | 103 | 753405 | 753508 | MAG: uncultured Chlamydiae bacterium isolate MFD00082.bin.c.5 genome assembly, chromosome: 1 | blastn | 1720 | 163 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 25832868 | 25832868 | PRJNA1233465f_S_NODE_78163_length_265_cov_2.032407_g75883_i0 | PRJNA1233465 | 78163 | 265 | 2.032407 | 5.38587855 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 169 | 2.31e-37 | NTclustered | gi|2874253676|emb|OY969110.1| | 305355 | g75883 | i0 | 95.327 | 6.58490566037736 | 107 | 4 | 40 | 1 | 160 | 265 | 753508 | 753402 | MAG: uncultured Chlamydiae bacterium isolate MFD00082.bin.c.5 genome assembly, chromosome: 1 | blastn | 1745 | 169 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 25955328 | 25955328 | PRJNA1233465e_S_NODE_138052_length_169_cov_1.291667_g136742_i0 | PRJNA1233465 | 138052 | 169 | 1.291667 | 2.18291723 | Criblamydia sequanensis CRIB-18 | 1437425 | Bacteria | Bacteria | 213 | 6.12e-51 | NTclustered | gi|678241437|emb|LK031773.1| | 1437425 | g136742 | i0 | 97.581 | 1.45562130177515 | 124 | 3 | 73 | 0 | 1 | 124 | 21993 | 21870 | Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence | blastn | 246 | 213 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 26225594 | 26225594 | PRJNA1233465d_S_NODE_83518_length_196_cov_2.428571_g82407_i0 | PRJNA1233465 | 83518 | 196 | 2.428571 | 4.75999916 | Criblamydia sequanensis CRIB-18 | 1437425 | Bacteria | Bacteria | 267 | 5.5599999999999996e-67 | NTclustered | gi|678241437|emb|LK031773.1| | 1437425 | g82407 | i0 | 98.039 | 1.56122448979592 | 153 | 3 | 78 | 0 | 1 | 153 | 22022 | 21870 | Criblamydia sequanensis plasmid 1, strain CRIB-18, complete sequence | blastn | 306 | 267 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Candidatus Criblamydiaceae | Candidatus Criblamydia | Candidatus Criblamydia sequanensis | |
| 26356821 | 26356821 | PRJNA1233465b_S_NODE_74535_length_306_cov_1.715953_g72850_i0 | PRJNA1233465 | 74535 | 306 | 1.715953 | 5.25081618 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 255 | 2.03e-63 | NTclustered | gi|2874253712|emb|OY969554.1| | 174324 | g72850 | i0 | 83.824 | 3.40196078431373 | 272 | 41 | 88 | 3 | 37 | 306 | 100482 | 100752 | MAG: uncultured Chlamydiales bacterium isolate MFD04540.bin.c.3 genome assembly, chromosome: 1 | blastn | 1041 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;