contig_metadata
52 rows where analysis = "blastn", bioproject = "PRJNA1233465" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25533921 | 25533921 | PRJNA1233465a_S_NODE_244193_length_162_cov_0.902655_g242919_i0 | PRJNA1233465 | 244193 | 162 | 0.902655 | 1.4623011 | Sulfurimonas sp. CS5 | 3391145 | Bacteria | Bacteria | 200 | 4.549999999999998e-47 | NTclustered | gi|2908503039|gb|CP180409.1| | 3391145 | g242919 | i0 | 88.889 | 21.2469135802469 | 162 | 18 | 100 | 0 | 1 | 162 | 1012508 | 1012669 | Sulfurimonas sp. CS5 chromosome, complete genome | blastn | 3442 | 200 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas sp. CS5 | ||
| 25538919 | 25538919 | PRJNA1233465b_S_NODE_305313_length_173_cov_3.153226_g303628_i0 | PRJNA1233465 | 305313 | 173 | 3.153226 | 5.45508098 | Campylobacter showae | 204 | Bacteria | Bacteria | 291 | 2.8299999999999998e-74 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g303628 | i0 | 97.633 | 14.1965317919075 | 169 | 4 | 98 | 0 | 5 | 173 | 1058797 | 1058629 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 2456 | 291 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 25539370 | 25539370 | PRJNA1233465b_S_NODE_344057_length_165_cov_1.318966_g342372_i0 | PRJNA1233465 | 344057 | 165 | 1.318966 | 2.1762939 | Campylobacter showae | 204 | Bacteria | Bacteria | 235 | 1.28e-57 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g342372 | i0 | 97.122 | 7.97575757575758 | 139 | 4 | 84 | 0 | 27 | 165 | 504570 | 504708 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 1316 | 235 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 25540304 | 25540304 | PRJNA1233465b_S_NODE_66081_length_319_cov_3.259259_g64396_i0 | PRJNA1233465 | 66081 | 319 | 3.259259 | 10.39703621 | Campylobacter showae | 204 | Bacteria | Bacteria | 544 | 4.0499999999999997e-150 | NTclustered | gi|1483583566|emb|LT631546.1| | 204 | g64396 | i0 | 99.013 | 0.952978056426332 | 304 | 2 | 95 | 1 | 3 | 305 | 128439 | 128742 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 304 | 544 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 25618847 | 25618847 | PRJNA1233465a_S_NODE_247961_length_161_cov_1.366071_g246687_i0 | PRJNA1233465 | 247961 | 161 | 1.366071 | 2.19937431 | root | 1 | Root_unresolved | Root_unresolved | 298 | 1.56e-76 | NTclustered | gi|1752751059|gb|CP044175.1| | 195 | g246687 | i0 | 100 | 47.0248447204969 | 161 | 0 | 100 | 0 | 1 | 161 | 1631823 | 1631663 | Campylobacter coli strain AR-0411 chromosome, complete genome | blastn | 7571 | 298 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 25619715 | 25619715 | PRJNA1233465b_S_NODE_173177_length_222_cov_2.063584_g171492_i0 | PRJNA1233465 | 173177 | 222 | 2.063584 | 4.58115648 | root | 1 | Root_unresolved | Root_unresolved | 411 | 2.8199999999999996e-110 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g171492 | i0 | 100 | 102.009009009009 | 222 | 0 | 100 | 0 | 1 | 222 | 1303634 | 1303855 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 22646 | 411 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 25622508 | 25622508 | PRJNA1233465e_S_NODE_82633_length_208_cov_2.421384_g81323_i0 | PRJNA1233465 | 82633 | 208 | 2.421384 | 5.03647872 | Campylobacter | 194 | Bacteria | Bacteria | 379 | 7.359999999999998e-101 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g81323 | i0 | 99.519 | 232.591346153846 | 208 | 1 | 100 | 0 | 1 | 208 | 1032444 | 1032237 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 48379 | 379 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 25622873 | 25622873 | PRJNA1233465f_S_NODE_140209_length_206_cov_2.751592_g137929_i0 | PRJNA1233465 | 140209 | 206 | 2.751592 | 5.66827952 | Bacteria | 2 | Bacteria | Bacteria | 67.6 | 6.43e-7 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g137929 | i0 | 100 | 35.6504854368932 | 36 | 0 | 17 | 0 | 171 | 206 | 43856 | 43821 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 7344 | 67.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 25623302 | 25623302 | PRJNA1233465f_S_NODE_209961_length_174_cov_1.856000_g207681_i0 | PRJNA1233465 | 209961 | 174 | 1.856 | 3.22944 | Bacteria | 2 | Bacteria | Bacteria | 73.1 | 1.12e-8 | NTclustered | gi|317373883|gb|HQ268884.1| | 210 | g207681 | i0 | 100 | 65.4367816091954 | 39 | 0 | 22 | 0 | 1 | 39 | 48 | 86 | Helicobacter pylori clone Hel-3-14A-65 23S ribosomal RNA (rrn) gene, partial sequence | blastn | 11386 | 73.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 25667108 | 25667108 | PRJNA1233465a_S_NODE_130970_length_206_cov_1.624204_g129696_i0 | PRJNA1233465 | 130970 | 206 | 1.624204 | 3.34586024 | Sulfurimonas denitrificans DSM 1251 | 326298 | Bacteria | Bacteria | 257 | 3.5600000000000004e-64 | NTclustered | gi|78496741|gb|CP000153.1| | 326298 | g129696 | i0 | 89.655 | 1.98543689320388 | 203 | 19 | 98 | 1 | 2 | 202 | 688860 | 689062 | Sulfurimonas denitrificans DSM 1251, complete genome | blastn | 409 | 257 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas denitrificans | ||
| 25671643 | 25671643 | PRJNA1233465a_S_NODE_80826_length_248_cov_2.472362_g79552_i0 | PRJNA1233465 | 80826 | 248 | 2.472362 | 6.13145776 | Campylobacter showae | 204 | Bacteria | Bacteria | 422 | 1.48e-113 | NTclustered | gi|1483583566|emb|LT631546.1| | 204 | g79552 | i0 | 99.149 | 0.94758064516129 | 235 | 1 | 94 | 1 | 1 | 234 | 128508 | 128742 | Campylobacter showae strain B32_SW genome assembly, chromosome: I | blastn | 235 | 422 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 25675739 | 25675739 | PRJNA1233465b_S_NODE_37914_length_387_cov_4.375740_g36234_i0 | PRJNA1233465 | 37914 | 387 | 4.37574 | 16.9341138 | Campylobacter concisus | 199 | Bacteria | Bacteria | 582 | 1.0599999999999999e-161 | NTclustered | gi|1938730527|gb|CP049274.1| | 199 | g36234 | i0 | 95.355 | 17.0387596899225 | 366 | 17 | 95 | 0 | 1 | 366 | 1532831 | 1533196 | Campylobacter concisus strain P10CDO-S2 chromosome, complete genome | blastn | 6594 | 582 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 25692103 | 25692103 | PRJNA1233465f_S_NODE_211442_length_174_cov_1.032000_g209162_i0 | PRJNA1233465 | 211442 | 174 | 1.032 | 1.79568 | Arcobacter nitrofigilis DSM 7299 | 572480 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|296095720|gb|CP001999.1| | 572480 | g209162 | i0 | 100 | 0.160919540229885 | 28 | 0 | 16 | 0 | 116 | 143 | 620385 | 620358 | Arcobacter nitrofigilis DSM 7299 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Arcobacter | Arcobacter nitrofigilis | ||
| 25692892 | 25692892 | PRJNA1233465f_S_NODE_230794_length_167_cov_2.593220_g228514_i0 | PRJNA1233465 | 230794 | 167 | 2.59322 | 4.3306774 | Nitrosophilus alvini | 2714855 | Bacteria | Bacteria | 58.4 | 3.01e-4 | NTclustered | gi|1917888250|dbj|AP022847.1| | 2714855 | g228514 | i0 | 100 | 0.18562874251497 | 31 | 0 | 19 | 0 | 7 | 37 | 66856 | 66886 | Nitrosophilus alvini DNA, complete genome | blastn | 31 | 58.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Nautiliales | Nitratiruptoraceae | Nitrosophilus | Nitrosophilus alvini | ||
| 25754605 | 25754605 | PRJNA1233465a_S_NODE_169602_length_186_cov_1.021898_g168328_i0 | PRJNA1233465 | 169602 | 186 | 1.021898 | 1.90073028 | Helicobacter | 209 | Bacteria | Bacteria | 215 | 1.92e-51 | NTclustered | gi|50957179|gb|AY596264.1| | 152489 | g168328 | i0 | 87.568 | 128.145161290323 | 185 | 23 | 99 | 0 | 1 | 185 | 407 | 223 | Helicobacter sp. MIT 99-5507 23S ribosomal RNA gene, partial sequence | blastn | 23835 | 215 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. MIT 99-5507 | ||
| 25812084 | 25812084 | PRJNA1233465b_S_NODE_44163_length_367_cov_6.113208_g42478_i0 | PRJNA1233465 | 44163 | 367 | 6.113208 | 22.43547336 | Campylobacter showae | 204 | Bacteria | Bacteria | 106 | 2.64e-18 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g42478 | i0 | 98.333 | 1.13623978201635 | 60 | 1 | 16 | 0 | 1 | 60 | 1199470 | 1199529 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 417 | 106 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 25890270 | 25890270 | PRJNA1233465a_S_NODE_166491_length_187_cov_1.623188_g165217_i0 | PRJNA1233465 | 166491 | 187 | 1.623188 | 3.03536156 | root | 1 | Root_unresolved | Root_unresolved | 346 | 6.56e-91 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g165217 | i0 | 100 | 104.780748663102 | 187 | 0 | 100 | 0 | 1 | 187 | 1305162 | 1304976 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 19594 | 346 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 25890502 | 25890502 | PRJNA1233465a_S_NODE_197371_length_174_cov_1.632000_g196097_i0 | PRJNA1233465 | 197371 | 174 | 1.632 | 2.83968 | Campylobacter | 194 | Bacteria | Bacteria | 196 | 6.39e-46 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g196097 | i0 | 100 | 206.212643678161 | 106 | 0 | 91 | 0 | 69 | 174 | 159633 | 159738 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 35881 | 196 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 25891899 | 25891899 | PRJNA1233465b_S_NODE_210299_length_205_cov_1.128205_g208614_i0 | PRJNA1233465 | 210299 | 205 | 1.128205 | 2.31282025 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 374 | 3.3599999999999997e-99 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g208614 | i0 | 99.512 | 100 | 205 | 1 | 100 | 0 | 1 | 205 | 701165 | 701369 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 20500 | 374 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 25893611 | 25893611 | PRJNA1233465d_S_NODE_82587_length_197_cov_1.959459_g81476_i0 | PRJNA1233465 | 82587 | 197 | 1.959459 | 3.86013423 | Bacteria | 2 | Bacteria | Bacteria | 84.2 | 6.05e-12 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g81476 | i0 | 100 | 47.0558375634518 | 45 | 0 | 23 | 0 | 153 | 197 | 43856 | 43812 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 9270 | 84.2 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 25894237 | 25894237 | PRJNA1233465e_S_NODE_4683_length_679_cov_113.973016_g3635_i0 | PRJNA1233465 | 4683 | 679 | 113.973016 | 773.87677864 | root | 1 | Root_unresolved | Root_unresolved | 1074 | 0 | NTclustered | gi|1145145120|gb|KX686749.1| | 195 | g3635 | i0 | 99.829 | 86.868924889543493 | 584 | 1 | 86 | 0 | 96 | 679 | 46142 | 46725 | Campylobacter coli strain Tx40 plasmid unnamed, complete sequence | blastn | 58984 | 1074 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 25894416 | 25894416 | PRJNA1233465e_S_NODE_74883_length_217_cov_1.517857_g73573_i0 | PRJNA1233465 | 74883 | 217 | 1.517857 | 3.29374969 | Campylobacter | 194 | Bacteria | Bacteria | 379 | 7.739999999999998e-101 | NTclustered | gi|1721134170|emb|LR698972.1| | 200 | g73573 | i0 | 98.598 | 24.2304147465438 | 214 | 3 | 99 | 0 | 1 | 214 | 298142 | 297929 | Campylobacter curvus isolate MGYG-HGUT-01706 genome assembly, chromosome: 1 | blastn | 5258 | 379 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 25895786 | 25895786 | PRJNA1233465f_S_NODE_53115_length_312_cov_4.809886_g50835_i0 | PRJNA1233465 | 53115 | 312 | 4.809886 | 15.00684432 | Campylobacter | 194 | Bacteria | Bacteria | 560 | 3.92e-155 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g50835 | i0 | 99.042 | 225.36858974359 | 313 | 2 | 100 | 1 | 1 | 312 | 1032478 | 1032166 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 70315 | 560 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 25948102 | 25948102 | PRJNA1233465b_S_NODE_382340_length_155_cov_3.537736_g380655_i0 | PRJNA1233465 | 382340 | 155 | 3.537736 | 5.4834908 | Campylobacter concisus | 199 | Bacteria | Bacteria | 268 | 1.16e-67 | NTclustered | gi|1938726479|gb|CP049270.1| | 199 | g380655 | i0 | 98.052 | 6.92903225806452 | 154 | 3 | 99 | 0 | 1 | 154 | 1349802 | 1349955 | Campylobacter concisus strain P26UCO-S2 chromosome, complete genome | blastn | 1074 | 268 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26026949 | 26026949 | PRJNA1233465a_S_NODE_215764_length_168_cov_0.932773_g214490_i0 | PRJNA1233465 | 215764 | 168 | 0.932773 | 1.56705864 | root | 1 | Root_unresolved | Root_unresolved | 300 | 4.56e-77 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g214490 | i0 | 98.81 | 100 | 168 | 2 | 100 | 0 | 1 | 168 | 698827 | 698660 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 16800 | 300 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 26028150 | 26028150 | PRJNA1233465b_S_NODE_185612_length_216_cov_1.473054_g183927_i0 | PRJNA1233465 | 185612 | 216 | 1.473054 | 3.18179664 | root | 1 | Root_unresolved | Root_unresolved | 399 | 5.909999999999999e-107 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g183927 | i0 | 100 | 100 | 216 | 0 | 100 | 0 | 1 | 216 | 697935 | 698150 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 21600 | 399 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 26028567 | 26028567 | PRJNA1233465b_S_NODE_279156_length_181_cov_1.159091_g277471_i0 | PRJNA1233465 | 279156 | 181 | 1.159091 | 2.09795471 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 329 | 6.340000000000001e-86 | NTclustered | gi|1226876681|gb|CP022559.1| | 197 | g277471 | i0 | 99.448 | 100 | 181 | 1 | 100 | 0 | 1 | 181 | 700952 | 701132 | Campylobacter jejuni strain 11168H/araE chromosome, complete genome | blastn | 18100 | 329 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 26078006 | 26078006 | PRJNA1233465a_S_NODE_236989_length_163_cov_1.403509_g235715_i0 | PRJNA1233465 | 236989 | 163 | 1.403509 | 2.28771967 | Sulfurimonas sp. CS5 | 3391145 | Bacteria | Bacteria | 99 | 1.72e-16 | NTclustered | gi|2908503039|gb|CP180409.1| | 3391145 | g235715 | i0 | 82.883 | 0.680981595092024 | 111 | 17 | 67 | 2 | 1 | 110 | 191059 | 190950 | Sulfurimonas sp. CS5 chromosome, complete genome | blastn | 111 | 99 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas sp. CS5 | ||
| 26105247 | 26105247 | PRJNA1233465f_S_NODE_81309_length_261_cov_1.165094_g79029_i0 | PRJNA1233465 | 81309 | 261 | 1.165094 | 3.04089534 | Campylobacter concisus | 199 | Bacteria | Bacteria | 401 | 2.0499999999999994e-107 | NTclustered | gi|1938726479|gb|CP049270.1| | 199 | g79029 | i0 | 95.968 | 89.6819923371648 | 248 | 9 | 95 | 1 | 5 | 252 | 1772321 | 1772567 | Campylobacter concisus strain P26UCO-S2 chromosome, complete genome | blastn | 23407 | 401 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26165532 | 26165532 | PRJNA1233465d_S_NODE_127901_length_166_cov_1.230769_g126790_i0 | PRJNA1233465 | 127901 | 166 | 1.230769 | 2.04307654 | Bacteria | 2 | Bacteria | Bacteria | 298 | 1.62e-76 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g126790 | i0 | 100 | 384.951807228916 | 161 | 0 | 97 | 0 | 1 | 161 | 553984 | 554144 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 63902 | 300 | 0.993333333333333 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 26166781 | 26166781 | PRJNA1233465e_S_NODE_48205_length_261_cov_2.783019_g46895_i0 | PRJNA1233465 | 48205 | 261 | 2.783019 | 7.26367959 | Campylobacter | 194 | Bacteria | Bacteria | 438 | 1.5599999999999993e-118 | NTclustered | gi|1721134170|emb|LR698972.1| | 200 | g46895 | i0 | 96.935 | 4.00766283524904 | 261 | 8 | 100 | 0 | 1 | 261 | 296156 | 295896 | Campylobacter curvus isolate MGYG-HGUT-01706 genome assembly, chromosome: 1 | blastn | 1046 | 438 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 26167537 | 26167537 | PRJNA1233465f_S_NODE_174045_length_188_cov_2.395683_g171765_i0 | PRJNA1233465 | 174045 | 188 | 2.395683 | 4.50388404 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.8 | 2.07e-6 | NTclustered | gi|2641930809|gb|CP078373.1| | 210 | g171765 | i0 | 100 | 60.9308510638298 | 35 | 0 | 19 | 0 | 52 | 86 | 4211 | 4177 | Helicobacter pylori strain HpGP-SGP-009 chromosome, complete genome | blastn | 11455 | 65.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26167787 | 26167787 | PRJNA1233465f_S_NODE_217109_length_172_cov_1.162602_g214829_i0 | PRJNA1233465 | 217109 | 172 | 1.162602 | 1.99967544 | Campylobacter | 194 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|1885696378|gb|CP059682.1| | 28080 | g214829 | i0 | 100 | 1.22093023255814 | 30 | 0 | 17 | 0 | 10 | 39 | 1390999 | 1390970 | Campylobacter upsaliensis strain FDAARGOS_736 chromosome, complete genome | blastn | 210 | 56.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter upsaliensis | ||
| 26220962 | 26220962 | PRJNA1233465b_S_NODE_69630_length_313_cov_4.253788_g67945_i0 | PRJNA1233465 | 69630 | 313 | 4.253788 | 13.31435644 | Campylobacter showae | 204 | Bacteria | Bacteria | 540 | 5.13e-149 | NTclustered | gi|1483583525|emb|LT631449.1| | 204 | g67945 | i0 | 97.764 | 12.0063897763578 | 313 | 7 | 100 | 0 | 1 | 313 | 211669 | 211981 | Campylobacter showae strain 129_VTPPs genome assembly, chromosome: I | blastn | 3758 | 540 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 26222210 | 26222210 | PRJNA1233465d_S_NODE_121310_length_169_cov_1.100000_g120199_i0 | PRJNA1233465 | 121310 | 169 | 1.1 | 1.859 | Helicobacter sp. MIT 99-55 | 218 | Bacteria | Bacteria | 108 | 2.97e-19 | NTclustered | gi|50957179|gb|AY596264.1| | 152489 | g120199 | i0 | 84.348 | 49.1420118343195 | 115 | 12 | 68 | 2 | 52 | 166 | 70 | 178 | Helicobacter sp. MIT 99-5507 23S ribosomal RNA gene, partial sequence | blastn | 8305 | 108 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter sp. MIT 99-5507 | ||
| 26224775 | 26224775 | PRJNA1233465d_S_NODE_62166_length_222_cov_1.109827_g61055_i0 | PRJNA1233465 | 62166 | 222 | 1.109827 | 2.46381594 | Malaciobacter molluscorum LMG 25693 | 870501 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|1474788135|gb|CP032098.1| | 870501 | g61055 | i0 | 100 | 0.126126126126126 | 28 | 0 | 13 | 0 | 81 | 108 | 412466 | 412439 | Malaciobacter molluscorum LMG 25693 strain CECT 7696 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Arcobacteraceae | Malaciobacter | Malaciobacter molluscorum | ||
| 26237831 | 26237831 | PRJNA1233465f_S_NODE_239766_length_166_cov_0.871795_g237486_i0 | PRJNA1233465 | 239766 | 166 | 0.871795 | 1.4471797 | Campylobacter curvus | 200 | Bacteria | Bacteria | 279 | 5.86e-71 | NTclustered | gi|1861373391|gb|CP053826.1| | 200 | g237486 | i0 | 96.988 | 4 | 166 | 5 | 100 | 0 | 1 | 166 | 306525 | 306690 | Campylobacter curvus strain ATCC 35224 chromosome, complete genome | blastn | 664 | 279 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 26298255 | 26298255 | PRJNA1233465a_S_NODE_126174_length_209_cov_1.875000_g124900_i0 | PRJNA1233465 | 126174 | 209 | 1.875 | 3.91875 | root | 1 | Root_unresolved | Root_unresolved | 387 | 4.42e-103 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g124900 | i0 | 100 | 100.593301435407 | 209 | 0 | 100 | 0 | 1 | 209 | 1303373 | 1303581 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 21024 | 387 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 26300443 | 26300443 | PRJNA1233465b_S_NODE_28678_length_429_cov_3.921053_g27009_i0 | PRJNA1233465 | 28678 | 429 | 3.921053 | 16.82131737 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.8 | 5.32e-6 | NTclustered | gi|2641930809|gb|CP078373.1| | 210 | g27009 | i0 | 100 | 26.7016317016317 | 35 | 0 | 8 | 0 | 288 | 322 | 4177 | 4211 | Helicobacter pylori strain HpGP-SGP-009 chromosome, complete genome | blastn | 11455 | 65.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26350987 | 26350987 | PRJNA1233465a_S_NODE_40919_length_316_cov_2.382022_g39645_i0 | PRJNA1233465 | 40919 | 316 | 2.382022 | 7.52718952 | Sulfurimonas xiamenensis | 2590021 | Bacteria | Bacteria | 141 | 6.14e-29 | NTclustered | gi|1768466554|gb|CP041166.1| | 2590021 | g39645 | i0 | 87.805 | 0.712025316455696 | 123 | 11 | 38 | 3 | 196 | 316 | 241689 | 241569 | Sulfurimonas xiamenensis strain 1-1N chromosome, complete genome | blastn | 225 | 141 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas xiamenensis | ||
| 26364175 | 26364175 | PRJNA1233465e_S_NODE_157887_length_163_cov_0.894737_g156577_i0 | PRJNA1233465 | 157887 | 163 | 0.894737 | 1.45842131 | Helicobacter pylori | 210 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2641471963|gb|CP078953.1| | 210 | g156577 | i0 | 100 | 0.687116564417178 | 28 | 0 | 17 | 0 | 135 | 162 | 1568788 | 1568815 | Helicobacter pylori strain HpGP-COL-204 chromosome, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 26437704 | 26437704 | PRJNA1233465d_S_NODE_27887_length_312_cov_18382.452471_g26776_i0 | PRJNA1233465 | 27887 | 312 | 18382.452471 | 57353.25170952 | root | 1 | Root_unresolved | Root_unresolved | 285 | 2.64e-72 | NTclustered | gi|1900841229|gb|MT107518.1| | 195 | g26776 | i0 | 100 | 50.0673076923077 | 154 | 0 | 49 | 0 | 67 | 220 | 8886 | 9039 | Campylobacter coli strain JZ_1_53 citrate lyase beta chain gene, partial cds; and CoA transferase, hypothetical protein, dicarboxylate carrier protein, transposase, IS605 OrfB family transposase, ribosomal RNA large subunit methyltransferase N (cfr(C)), aminoglycoside O-phosphotransferase APH(3')-IIIa (aph(3')-IIIa), and hypothetical protein genes, complete cds | blastn | 15621 | 287 | 0.993031358885017 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 26486131 | 26486131 | PRJNA1233465a_S_NODE_229248_length_165_cov_0.879310_g227974_i0 | PRJNA1233465 | 229248 | 165 | 0.87931 | 1.4508615 | Campylobacter rectus | 203 | Bacteria | Bacteria | 289 | 9.66e-74 | NTclustered | gi|1622745323|gb|CP012543.1| | 203 | g227974 | i0 | 98.182 | 2 | 165 | 3 | 100 | 0 | 1 | 165 | 923428 | 923592 | Campylobacter rectus strain ATCC 33238, complete genome | blastn | 330 | 289 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter rectus | ||
| 26486219 | 26486219 | PRJNA1233465a_S_NODE_23288_length_389_cov_2.738235_g22016_i0 | PRJNA1233465 | 23288 | 389 | 2.738235 | 10.65173415 | uncultured Sulfurimonas sp. | 291845 | Bacteria | Bacteria | 204 | 9.7e-48 | NTclustered | gi|2621701203|emb|OY759725.1| | 291845 | g22016 | i0 | 83.408 | 0.573264781491003 | 223 | 33 | 57 | 4 | 93 | 313 | 833767 | 833547 | MAG: uncultured Sulfurimonas sp. isolate a78221b3-3849-449b-b167-7d88721915ac genome assembly, chromosome: 1 | blastn | 223 | 204 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | uncultured Sulfurimonas sp. | ||
| 26487494 | 26487494 | PRJNA1233465a_S_NODE_50768_length_293_cov_2.872951_g49494_i0 | PRJNA1233465 | 50768 | 293 | 2.872951 | 8.41774643 | Sulfurimonas paralvinellae | 317658 | Bacteria | Bacteria | 207 | 5.48e-49 | NTclustered | gi|1917895989|gb|CP041406.1| | 317658 | g49494 | i0 | 80 | 1.95904436860068 | 295 | 47 | 99 | 10 | 4 | 293 | 1649729 | 1649442 | Sulfurimonas paralvinellae strain GO25 chromosome, complete genome | blastn | 574 | 207 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Sulfurimonas paralvinellae | ||
| 26488280 | 26488280 | PRJNA1233465a_S_NODE_81304_length_248_cov_1.216080_g80030_i0 | PRJNA1233465 | 81304 | 248 | 1.21608 | 3.0158784 | Candidatus Sulfurimonas baltica | 2740404 | Bacteria | Bacteria | 202 | 2.0999999999999998e-47 | NTclustered | gi|1929272150|gb|CP054492.1| | 2740404 | g80030 | i0 | 83.111 | 0.907258064516129 | 225 | 35 | 90 | 2 | 1 | 222 | 1038733 | 1038509 | Candidatus Sulfurimonas baltica strain GD2 chromosome, complete genome | blastn | 225 | 202 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfurimonas | Candidatus Sulfurimonas baltica | ||
| 26490625 | 26490625 | PRJNA1233465b_S_NODE_234720_length_195_cov_2.458904_g233035_i0 | PRJNA1233465 | 234720 | 195 | 2.458904 | 4.7948628 | Campylobacter showae | 204 | Bacteria | Bacteria | 324 | 3.2299999999999998e-84 | NTclustered | gi|1483583529|emb|LT631453.1| | 204 | g233035 | i0 | 97.861 | 92.6666666666667 | 187 | 4 | 96 | 0 | 1 | 187 | 1462476 | 1462662 | Campylobacter showae strain B91_SCBr genome assembly, chromosome: I | blastn | 18070 | 324 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 26493047 | 26493047 | PRJNA1233465b_S_NODE_70984_length_311_cov_3.507634_g69299_i0 | PRJNA1233465 | 70984 | 311 | 3.507634 | 10.90874174 | Campylobacter concisus | 199 | Bacteria | Bacteria | 492 | 1.45e-134 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g69299 | i0 | 95.177 | 17 | 311 | 15 | 100 | 0 | 1 | 311 | 140206 | 139896 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 5287 | 492 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26511769 | 26511769 | PRJNA1233465f_S_NODE_39056_length_356_cov_1.957655_g36776_i0 | PRJNA1233465 | 39056 | 356 | 1.957655 | 6.9692518 | Campylobacter curvus | 200 | Bacteria | Bacteria | 603 | 7.419999999999997e-168 | NTclustered | gi|1861373391|gb|CP053826.1| | 200 | g36776 | i0 | 97.191 | 5.06741573033708 | 356 | 10 | 100 | 0 | 1 | 356 | 293961 | 293606 | Campylobacter curvus strain ATCC 35224 chromosome, complete genome | blastn | 1804 | 603 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter curvus | ||
| 26570584 | 26570584 | PRJNA1233465a_S_NODE_177920_length_182_cov_1.390977_g176646_i0 | PRJNA1233465 | 177920 | 182 | 1.390977 | 2.53157814 | root | 1 | Root_unresolved | Root_unresolved | 327 | 2.3e-85 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g176646 | i0 | 99.444 | 100.89010989011 | 180 | 1 | 99 | 0 | 1 | 180 | 1303770 | 1303591 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 18362 | 327 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 26571901 | 26571901 | PRJNA1233465b_S_NODE_167856_length_225_cov_1.846591_g166171_i0 | PRJNA1233465 | 167856 | 225 | 1.846591 | 4.15482975 | Campylobacter | 194 | Bacteria | Bacteria | 416 | 6.159999999999998e-112 | NTclustered | gi|930358546|gb|CP012541.1| | 199 | g166171 | i0 | 100 | 241.635555555556 | 225 | 0 | 100 | 0 | 1 | 225 | 1114190 | 1114414 | Campylobacter concisus strain ATCC 33237 chromosome, complete genome | blastn | 54368 | 416 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 26573436 | 26573436 | PRJNA1233465d_S_NODE_25456_length_325_cov_2.253623_g24345_i0 | PRJNA1233465 | 25456 | 325 | 2.253623 | 7.32427475 | Campylobacter | 194 | Bacteria | Bacteria | 566 | 8.819999999999998e-157 | NTclustered | gi|1935888393|gb|CP049239.1| | 199 | g24345 | i0 | 98.746 | 220.403076923077 | 319 | 3 | 98 | 1 | 8 | 325 | 1032483 | 1032165 | Campylobacter concisus strain P3UCO1 chromosome, complete genome | blastn | 71631 | 566 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;