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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA1233317" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 6 ✖

bioproject 1

  • PRJNA1233317 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2886507 2886507 PRJNA1233317_S_NODE_12603_length_218_cov_4.194969_g12567_i0 PRJNA1233317 12603 218 4.194969 9.14503242 Caudoviricetes sp. 2832643 Viruses Viruses 71.3 5.32e-8   NTclustered gi|2914752462|gb|OR221364.1| 2832643 g12567 i0 100 17.2844036697248 38 0 17 0 2 39 41863 41826 MAG: Caudoviricetes sp. isolate MSP1735 genomic sequence blastn 3768 71.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
4875225 4875225 PRJNA1233317_S_NODE_1924_length_395_cov_2.723214_g1888_i0 PRJNA1233317 1924 395 2.723214 10.7566953 Viruses 10239 Viruses Viruses 730 0   NTclustered gi|2293593660|gb|OP072582.1| 38018 g1888 i0 100 6 395 0 100 0 1 395 21107 20713 MAG: Bacteriophage sp. isolate 3303_62993, partial genome blastn 2370 730 1 Viruses               Bacteriophage sp.
5438854 5438854 PRJNA1233317_S_NODE_12865_length_216_cov_1.942675_g12829_i0 PRJNA1233317 12865 216 1.942675 4.196178 Pandoravirus belohorizontensis 2847767 Viruses Viruses 331 2.19e-86   NTclustered gi|2203410818|gb|MZ420562.1| 2847767 g12829 i0 96.078 1.7962962962963 204 6 94 1 1 202 504229 504432 Pandoravirus belohorizontensis, partial genome blastn 388 331 1 Viruses             Pandoravirus Pandoravirus belohorizontensis
14364619 14364619 PRJNA1233317_S_NODE_2892_length_364_cov_3.265574_g2856_i0 PRJNA1233317 2892 364 3.265574 11.88668936 Bacteriophage sp. 38018 Viruses Viruses 431 3.7999999999999996e-116   NTclustered gi|2295420087|gb|OP075984.1| 38018 g2856 i0 88.857 4.81593406593407 350 39 96 0 3 352 42712 43061 MAG: Bacteriophage sp. isolate 3998_43183, partial genome blastn 1753 431 1 Viruses               Bacteriophage sp.
19461703 19461703 PRJNA1233317_S_NODE_9176_length_256_cov_3.705584_g9140_i0 PRJNA1233317 9176 256 3.705584 9.48629504 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g9140 i0 96.97 0.67578125 33 1 13 0 224 256 45 13 Carnation latent virus isolate KL, complete genome blastn 173 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
23287863 23287863 PRJNA1233317_S_NODE_11919_length_225_cov_1.765060_g11883_i0 PRJNA1233317 11919 225 1.76506 3.971385 Pestivirus brazilense 3052620 Viruses Viruses 344 2.95e-90   NTclustered gi|1532344909|gb|KY762287.2| 381707 g11883 i0 94.222 28.9422222222222 225 13 100 0 1 225 8033 7809 Bovine viral diarrhea virus 3 strain PB22487, complete genome blastn 6512 344 1 Viruses   Orthornavirae Kitrinoviricota Flasuviricetes Amarillovirales Flaviviridae Pestivirus Pestivirus brazilense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;