RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1233317" and tax_clade = "Sar"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA1233317 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4162698 4162698 PRJNA1233317_S_NODE_584_length_539_cov_9.385417_g549_i0 PRJNA1233317 584 539 9.385417 50.58739763 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 453 1.24e-122   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g549 i0 100 586.161410018553 245 0 45 0 1 245 1870 1626 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 315941 453 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
13089359 13089359 PRJNA1233317_S_NODE_7851_length_274_cov_5.162791_g7815_i0 PRJNA1233317 7851 274 5.162791 14.14604734 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 468 2.11e-127   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g7815 i0 97.455 1226.54744525547 275 6 100 1 1 274 1248 974 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 336074 468 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;