RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1227535" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1227535 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
335312 335312 PRJNA1227535_P_NODE_23501_length_251_cov_0.876404_g23377_i0 PRJNA1227535 23501 251 0.876404 2.19977404 Candidatus Mycosynbacter amalyticus 2665156 Bacteria Bacteria 156 1.69e-33   NTclustered gi|1799615131|gb|CP045921.1| 2665156 g23377 i0 98.864 44.5338645418327 88 0 35 1 122 209 187064 187150 Candidatus Mycosynbacter amalyticus isolate JR1 chromosome, complete genome blastn 11178 156 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Mycosynbacter Candidatus Mycosynbacter amalyticus
6712963 6712963 PRJNA1227535_P_NODE_18326_length_264_cov_1.628272_g18202_i0 PRJNA1227535 18326 264 1.628272 4.29863808 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 427 3.43e-115   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g18202 i0 95.833 4.17045454545455 264 11 100 0 1 264 263143 263406 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 1101 427 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;