RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1218818" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1218818 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16348837 16348837 PRJNA1218818_P_NODE_27293_length_244_cov_0.900585_g27226_i0 PRJNA1218818 27293 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 446 8.639999999999999e-121   NTclustered gi|1962580014|emb|OC914861.1| 334625 g27226 i0 99.59 10.4385245901639 244 1 100 0 1 244 1824 2067 Oppiella nova blastn 2547 446 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Oppiidae Oppiella Oppiella nova
23998416 23998416 PRJNA1218818_P_NODE_13839_length_331_cov_1.674419_g13772_i0 PRJNA1218818 13839 331 1.674419 5.54232689 Insecta 50557 Arthropoda Arthropoda 363 1.2699999999999999e-95   NTclustered gi|1484460828|ref|XM_026611478.1| 7515 g13772 i0 86.486 97.4864048338369 333 41 100 4 1 331 680 350 PREDICTED: Ctenocephalides felis actin, muscle (LOC113370787), mRNA blastn 32268 363 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Siphonaptera Pulicidae Ctenocephalides Ctenocephalides felis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;