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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1218816" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1218816 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
333176 333176 PRJNA1218816_P_NODE_23601_length_436_cov_3.217631_g23168_i0 PRJNA1218816 23601 436 3.217631 14.02887116 Vittaforma corneae 42399 Fungi Fungi 462 1.64e-125   NTclustered gi|667639983|ref|XR_552275.1| 993615 g23168 i0 85.811 18.1605504587156 444 53 100 7 1 436 458 17 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 7918 462 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
8699250 8699250 PRJNA1218816_P_NODE_22887_length_446_cov_2.900804_g22454_i0 PRJNA1218816 22887 446 2.900804 12.93758584 Heterosporis 157917 Fungi Fungi 662 0   NTclustered gi|448278458|gb|KC137554.1| 1289055 g22454 i0 94.614 36.585201793722 427 23 96 0 1 427 3670 3244 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16317 662 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
11811976 11811976 PRJNA1218816_P_NODE_3270_length_1627_cov_6.016088_g3091_i0 PRJNA1218816 3270 1627 6.016088 97.88175176 Pleistophora mulleri 249366 Fungi Fungi 1513 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g3091 i0 83.603 35.7947141979103 1671 206 100 57 1 1627 3024 1378 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 58238 1513 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
14362481 14362481 PRJNA1218816_P_NODE_50932_length_260_cov_2.133690_g50499_i0 PRJNA1218816 50932 260 2.13369 5.547594 Microsporidia sp. MB 2715920 Fungi Fungi 394 3.419999999999999e-105   NTclustered gi|1819774651|gb|MT160806.1| 2715920 g50499 i0 94.186 81.8423076923077 258 15 99 0 1 258 943 1200 Microsporidia sp. MB isolate AH240 small subunit ribosomal RNA gene, partial sequence blastn 21279 394 1 Eukaryota Opisthokonta Fungi Microsporidia         Microsporidia sp. MB
19459296 19459296 PRJNA1218816_P_NODE_28936_length_377_cov_1.924342_g28503_i0 PRJNA1218816 28936 377 1.924342 7.25476934 uncultured Microsporidia 546760 Fungi Fungi 608 1.699999999999999e-169   NTclustered gi|374706411|gb|JN619406.1| 546760 g28503 i0 95.756 100.697612732095 377 16 100 0 1 377 16 392 Uncultured Microsporidia clone Chula_Myositis 1 small subunit ribosomal RNA gene, partial sequence blastn 37963 608 1 Eukaryota Opisthokonta Fungi Microsporidia         uncultured Microsporidia
19459582 19459582 PRJNA1218816_P_NODE_6276_length_1118_cov_3.741627_g5979_i0 PRJNA1218816 6276 1118 3.741627 41.83138986 Vittaforma corneae 42399 Fungi Fungi 1286 0   NTclustered gi|667639983|ref|XR_552275.1| 993615 g5979 i0 87.522 15.2191413237925 1130 120 100 18 1 1118 1593 473 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 17015 1286 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
22010173 22010173 PRJNA1218816_P_NODE_5038_length_1272_cov_6.705588_g4782_i0 PRJNA1218816 5038 1272 6.705588 85.29507936 Pseudoloma neurophilia 146866 Fungi Fungi 2337 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g4782 i0 99.764 93.0125786163522 1272 3 100 0 1 1272 1318 47 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 118312 2337 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;