contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA1218816" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6711270 | 6711270 | PRJNA1218816_P_NODE_53046_length_253_cov_1.488889_g52613_i0 | PRJNA1218816 | 53046 | 253 | 1.488889 | 3.76688917 | uncultured Chloroflexota bacterium | 166587 | Bacteria | Bacteria | 429 | 9.079999999999999e-116 | NTclustered | gi|307112323|gb|HQ132380.1| | 166587 | g52613 | i0 | 97.233 | 100.320158102767 | 253 | 7 | 100 | 0 | 1 | 253 | 303 | 51 | Uncultured Chloroflexi bacterium clone X-49 16S ribosomal RNA gene, partial sequence | blastn | 25381 | 429 | 1 | Bacteria | Bacillati | Chloroflexota | uncultured Chloroflexota bacterium | ||||||
| 7987008 | 7987008 | PRJNA1218816_P_NODE_9707_length_836_cov_1.813893_g9332_i0 | PRJNA1218816 | 9707 | 836 | 1.813893 | 15.16414548 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 972 | 0 | NTclustered | gi|2874253704|emb|OY969431.1| | 1672391 | g9332 | i0 | 87.886 | 286.058612440191 | 842 | 83 | 99 | 16 | 1 | 833 | 63879 | 64710 | MAG: uncultured Chloroflexia bacterium isolate MFD02979.bin.c.2 genome assembly, chromosome: 1 | blastn | 239145 | 972 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 10537301 | 10537301 | PRJNA1218816_P_NODE_49429_length_266_cov_1.196891_g48996_i0 | PRJNA1218816 | 49429 | 266 | 1.196891 | 3.18373006 | Tepidiforma bonchosmolovskayae | 2601677 | Bacteria | Bacteria | 219 | 2.27e-52 | NTclustered | gi|1756502384|gb|CP042829.1| | 2601677 | g48996 | i0 | 82.937 | 196.289473684211 | 252 | 34 | 93 | 9 | 1 | 248 | 2202014 | 2202260 | Tepidiforma bonchosmolovskayae strain 3753O chromosome, complete genome | blastn | 52213 | 219 | 1 | Bacteria | Bacillati | Chloroflexota | Tepidiformia | Tepidiformales | Tepidiformaceae | Tepidiforma | Tepidiforma bonchosmolovskayae | ||
| 17623992 | 17623992 | PRJNA1218816_P_NODE_30434_length_364_cov_2.635739_g30001_i0 | PRJNA1218816 | 30434 | 364 | 2.635739 | 9.59408996 | Bacillati | 1783272 | Bacteria | Bacteria | 340 | 6.579999999999999e-89 | NTclustered | gi|1932369605|gb|CP062983.1| | 2710758 | g30001 | i0 | 83.924 | 179.739010989011 | 367 | 47 | 99 | 10 | 2 | 364 | 2828217 | 2827859 | Phototrophicus methaneseepsis strain ZRK33 chromosome, complete genome | blastn | 65425 | 342 | 0.994152046783626 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicus | Phototrophicus methaneseepsis | ||
| 22009980 | 22009980 | PRJNA1218816_P_NODE_25538_length_412_cov_2.587021_g25105_i0 | PRJNA1218816 | 25538 | 412 | 2.587021 | 10.65852652 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 459 | 2.0000000000000003e-124 | NTclustered | gi|2874254062|emb|OY970386.1| | 1672391 | g25105 | i0 | 86.842 | 109.711165048544 | 418 | 45 | 100 | 8 | 1 | 412 | 1889839 | 1889426 | MAG: uncultured Chloroflexia bacterium isolate MFD03726.bin.c.14 genome assembly, chromosome: 1 | blastn | 45201 | 459 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;