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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA1218816" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA1218816 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3596752 3596752 PRJNA1218816_P_NODE_21663_length_465_cov_1.002551_g21230_i0 PRJNA1218816 21663 465 1.002551 4.66186215 Leishmania 5658 Euglenozoa other_Eukaryota 276 2.4599999999999997e-69   NTclustered gi|2794986241|ref|XM_067853970.1| 2802991 g21230 i0 79.449 39.5612903225806 399 74 85 8 52 446 395 1 Leishmania sp. Namibia uncharacterized protein (JIQ42_05862), partial mRNA blastn 18396 276 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
4160580 4160580 PRJNA1218816_P_NODE_60404_length_244_cov_0.900585_g59971_i0 PRJNA1218816 60404 244 0.900585 2.1974274 Neobodo saliens 351712 Euglenozoa other_Eukaryota 296 9.21e-76   NTclustered gi|25986824|gb|AY122626.1| 351712 g59971 i0 88.797 88.016393442623 241 27 99 0 3 243 1804 1564 Bodo saliens strain ATCC 50358 clone 5 heat shock protein 90 (HSP-90) gene, partial cds blastn 21476 296 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo saliens
4160587 4160587 PRJNA1218816_P_NODE_60904_length_243_cov_0.905882_g60471_i0 PRJNA1218816 60904 243 0.905882 2.20129326 Leishmania major 5664 Euglenozoa other_Eukaryota 134 7.6e-27   NTclustered gi|157867286|ref|XM_001682146.1| 347515 g60471 i0 85.385 5.7119341563786 130 17 53 2 10 138 28 156 Leishmania major strain Friedlin putative 60S ribosomal protein L39 partial mRNA blastn 1388 134 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
5436698 5436698 PRJNA1218816_P_NODE_51605_length_258_cov_1.627027_g51172_i0 PRJNA1218816 51605 258 1.627027 4.19772966 Porcisia hertigi 2761500 Euglenozoa other_Eukaryota 161 3.74e-35   NTclustered gi|2794831659|ref|XM_067901695.1| 2761500 g51172 i0 83.708 25.1860465116279 178 22 67 6 1 173 430 255 Porcisia hertigi uncharacterized protein (JKF63_05741), partial mRNA blastn 6498 161 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Porcisia Porcisia hertigi
9261202 9261202 PRJNA1218816_P_NODE_17948_length_533_cov_1.908696_g17519_i0 PRJNA1218816 17948 533 1.908696 10.17334968 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 399 1.6199999999999995e-106   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g17519 i0 97.046 100.37148217636 237 7 78 0 295 531 4971 5207 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 53498 399 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
13087101 13087101 PRJNA1218816_P_NODE_42611_length_293_cov_1.759091_g42178_i0 PRJNA1218816 42611 293 1.759091 5.15413663 Tulamoeba bucina 1525745 Heterolobosea other_Eukaryota 121 7.339999999999999e-23   NTclustered gi|667714320|gb|KJ776753.1| 1525745 g42178 i0 82.609 40.9317406143345 138 23 47 1 1 138 429 293 Tulamoeba sp. AGBS-2014a 18S ribosomal RNA gene, partial sequence blastn 11993 121 1 Eukaryota Discoba   Heterolobosea     Tulamoebidae Tulamoeba Tulamoeba bucina
15073852 15073852 PRJNA1218816_P_NODE_49732_length_264_cov_7.670157_g49299_i0 PRJNA1218816 49732 264 7.670157 20.24921448 Naegleria 5761 Heterolobosea other_Eukaryota 65.8 3.1e-6   NTclustered gi|38606345|gb|AY376153.1| 5762 g49299 i0 97.368 6.19318181818182 38 1 14 0 175 212 1011 1048 Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 1635 65.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
15636473 15636473 PRJNA1218816_P_NODE_57653_length_247_cov_0.885057_g57220_i0 PRJNA1218816 57653 247 0.885057 2.18609079 Neobodo designis 312471 Euglenozoa other_Eukaryota 401 1.9199999999999992e-107   NTclustered gi|59891962|gb|AY753622.1| 312471 g57220 i0 95.968 96 248 9 100 1 1 247 960 713 Neobodo designis isolate Dune 18S ribosomal RNA gene, partial sequence blastn 23712 401 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
18897754 18897754 PRJNA1218816_P_NODE_33555_length_342_cov_1.092937_g33122_i0 PRJNA1218816 33555 342 1.092937 3.73784454 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 255 2.3e-63   NTclustered gi|2593260053|emb|OY748516.1| 5660 g33122 i0 80.403 62.5789473684211 347 58 100 10 1 342 907221 907562 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 30 blastn 21402 255 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
20734787 20734787 PRJNA1218816_P_NODE_34637_length_335_cov_1.011450_g34204_i0 PRJNA1218816 34637 335 1.01145 3.3883575 Angomonas deanei 59799 Euglenozoa other_Eukaryota 322 2.18e-83   NTclustered gi|242133530|gb|GQ153664.1| 59799 g34204 i0 84.735 26.2716417910448 321 49 96 0 1 321 3262 2942 Crithidia sp. ATCC 30255 clone fosmid 6b12 genomic sequence blastn 8801 322 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
23285812 23285812 PRJNA1218816_P_NODE_62039_length_242_cov_0.911243_g61606_i0 PRJNA1218816 62039 242 0.911243 2.20520806 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 224 4.369999999999999e-54   NTclustered gi|1673134151|ref|XM_029369857.1| 83891 g61606 i0 83.402 10.8801652892562 241 40 99 0 1 241 594 834 Trypanosoma conorhini elongation factor 2 (Tco025E_02934), partial mRNA blastn 2633 224 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
25272422 25272422 PRJNA1218816_P_NODE_22280_length_455_cov_3.541885_g21847_i0 PRJNA1218816 22280 455 3.541885 16.11557675 Leishmania 5658 Euglenozoa other_Eukaryota 429 1.7399999999999999e-115   NTclustered gi|2593250474|emb|OY748421.1| 5660 g21847 i0 83.884 114.898901098901 484 43 100 21 1 455 991046 990569 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 52279 429 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;