RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 2 ✖

bioproject 1

  • PRJNA1215813 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15634630 15634630 PRJNA1215813_P_NODE_11173_length_247_cov_0.896552_g11093_i0 PRJNA1215813 11173 247 0.896552 2.21448344 Caudoviricetes sp. 2832643 Viruses Viruses 67.6 7.97e-7   NTclustered gi|2059648567|tpg|BK028738.1| 2832643 g11093 i0 95.238 0.866396761133603 42 2 17 0 173 214 12537 12578 MAG TPA_asm: Caudoviricetes sp. isolate ctAhW3, partial genome blastn 214 67.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15634640 15634640 PRJNA1215813_P_NODE_11873_length_244_cov_0.912281_g11793_i0 PRJNA1215813 11873 244 0.912281 2.22596564 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 285 1.99e-72   NTclustered gi|2754691800|gb|PP872668.1| 3003959 g11793 i0 87.705 1 244 30 100 0 1 244 6519 6762 MAG: Picornavirales sp. isolate TC-PLV-112 MR233-17E/429 genomic sequence blastn 244 285 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;