contig_metadata
43 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1045808 | 1045808 | PRJNA1215813_P_NODE_6701_length_303_cov_1.017391_g6621_i0 | PRJNA1215813 | 6701 | 303 | 1.017391 | 3.08269473 | Methylophilus | 16 | Bacteria | Bacteria | 527 | 3.8499999999999985e-145 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g6621 | i0 | 98.02 | 121.874587458746 | 303 | 6 | 100 | 0 | 1 | 303 | 2986529 | 2986831 | Methylophilus methylotrophus strain D22 chromosome | blastn | 36928 | 527 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 1606450 | 1606450 | PRJNA1215813_P_NODE_11002_length_247_cov_0.896552_g10922_i0 | PRJNA1215813 | 11002 | 247 | 0.896552 | 2.21448344 | Phreatobacter cathodiphilus | 1868589 | Bacteria | Bacteria | 84.2 | 7.92e-12 | NTclustered | gi|1364845349|gb|CP027668.1| | 1868589 | g10922 | i0 | 82.653 | 32.9028340080972 | 98 | 13 | 39 | 4 | 137 | 232 | 4352805 | 4352900 | Phreatobacter cathodiphilus strain S-12 chromosome, complete genome | blastn | 8127 | 84.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phreatobacteraceae | Phreatobacter | Phreatobacter cathodiphilus | ||
| 2882615 | 2882615 | PRJNA1215813_P_NODE_10023_length_251_cov_0.876404_g9943_i0 | PRJNA1215813 | 10023 | 251 | 0.876404 | 2.19977404 | Brucella anthropi | 529 | Bacteria | Bacteria | 425 | 1.16e-114 | NTclustered | gi|1929917788|gb|CP064062.1| | 529 | g9943 | i0 | 97.211 | 3 | 251 | 7 | 100 | 0 | 1 | 251 | 1053740 | 1053490 | Brucella anthropi strain PBO chromosome 1, complete sequence | blastn | 753 | 425 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 4873931 | 4873931 | PRJNA1215813_P_NODE_10304_length_250_cov_0.881356_g10224_i0 | PRJNA1215813 | 10304 | 250 | 0.881356 | 2.20339 | root | 1 | Root_unresolved | Root_unresolved | 462 | 8.83e-126 | NTclustered | gi|2706519156|gb|CP149578.1| | 287 | g10224 | i0 | 100 | 100 | 250 | 0 | 100 | 0 | 1 | 250 | 6007349 | 6007598 | Mutant Pseudomonas aeruginosa isolate FELIX_MS413, complete genome | blastn | 25000 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas aeruginosa | ||
| 4873951 | 4873951 | PRJNA1215813_P_NODE_6924_length_297_cov_1.750000_g6844_i0 | PRJNA1215813 | 6924 | 297 | 1.75 | 5.1975 | Pseudomonadota | 1224 | Bacteria | Bacteria | 549 | 8.029999999999997e-152 | NTclustered | gi|2103567975|gb|OK326642.1| | 479 | g6844 | i0 | 100 | 106 | 297 | 0 | 100 | 0 | 1 | 297 | 713 | 417 | Moraxella sp. strain Y2-U-1 16S ribosomal RNA gene, partial sequence | blastn | 31482 | 549 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Moraxella | Moraxella sp. | ||
| 5434913 | 5434913 | PRJNA1215813_P_NODE_10025_length_251_cov_0.876404_g9945_i0 | PRJNA1215813 | 10025 | 251 | 0.876404 | 2.19977404 | Tahibacter amnicola | 2976241 | Bacteria | Bacteria | 69.4 | 2.26e-7 | NTclustered | gi|2308858809|gb|CP104694.1| | 2976241 | g9945 | i0 | 89.091 | 0.585657370517928 | 55 | 6 | 22 | 0 | 109 | 163 | 6240653 | 6240707 | Tahibacter amnicola strain W38 chromosome | blastn | 147 | 69.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Rhodanobacteraceae | Tahibacter | Tahibacter amnicola | ||
| 5434945 | 5434945 | PRJNA1215813_P_NODE_12305_length_243_cov_0.917647_g12225_i0 | PRJNA1215813 | 12305 | 243 | 0.917647 | 2.22988221 | Massilia varians | 457921 | Bacteria | Bacteria | 278 | 3.3200000000000004e-70 | NTclustered | gi|2327757735|dbj|AP026966.1| | 457921 | g12225 | i0 | 88.646 | 7.05761316872428 | 229 | 24 | 94 | 2 | 1 | 228 | 506327 | 506100 | Massilia varians N-3 DNA, complete genome | blastn | 1715 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Massilia | Massilia varians | ||
| 5435077 | 5435077 | PRJNA1215813_P_NODE_7925_length_279_cov_1.422330_g7845_i0 | PRJNA1215813 | 7925 | 279 | 1.42233 | 3.9683007 | Methylophilus methylotrophus | 17 | Bacteria | Bacteria | 505 | 1.6399999999999995e-138 | NTclustered | gi|1525772245|gb|CP033953.1| | 17 | g7845 | i0 | 99.283 | 124.73835125448 | 279 | 2 | 100 | 0 | 1 | 279 | 2985404 | 2985682 | Methylophilus methylotrophus strain D22 chromosome | blastn | 34802 | 505 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Methylophilaceae | Methylophilus | Methylophilus methylotrophus | ||
| 5435095 | 5435095 | PRJNA1215813_P_NODE_8805_length_262_cov_1.238095_g8725_i0 | PRJNA1215813 | 8805 | 262 | 1.238095 | 3.2438089 | uncultured Rickettsiales bacterium | 219660 | Bacteria | Bacteria | 451 | 2.02e-122 | NTclustered | gi|339645770|gb|JN032387.1| | 219660 | g8725 | i0 | 97.71 | 98.381679389313 | 262 | 6 | 100 | 0 | 1 | 262 | 263 | 2 | Uncultured Rickettsiales bacterium clone WeeA_E07 16S ribosomal RNA gene, partial sequence | blastn | 25776 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | uncultured Rickettsiales bacterium | ||||
| 6148640 | 6148640 | PRJNA1215813_P_NODE_11845_length_244_cov_0.912281_g11765_i0 | PRJNA1215813 | 11845 | 244 | 0.912281 | 2.22596564 | Brucella | 234 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|1761803076|gb|CP044970.1| | 529 | g11765 | i0 | 100 | 16.9918032786885 | 244 | 0 | 100 | 0 | 1 | 244 | 2584709 | 2584952 | Brucella anthropi strain T16R-87 chromosome 1, complete sequence | blastn | 4146 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 6709652 | 6709652 | PRJNA1215813_P_NODE_8266_length_272_cov_1.567839_g8186_i0 | PRJNA1215813 | 8266 | 272 | 1.567839 | 4.26452208 | Vibrio metoecus | 1481663 | Bacteria | Bacteria | 503 | 5.729999999999998e-138 | NTclustered | gi|2556688018|gb|CP129421.1| | 1481663 | g8186 | i0 | 100 | 898.165441176471 | 272 | 0 | 100 | 0 | 1 | 272 | 146276 | 146005 | Vibrio metoecus strain ZF102 chromosome 1, complete sequence | blastn | 244301 | 503 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio metoecus | ||
| 7985249 | 7985249 | PRJNA1215813_P_NODE_9427_length_253_cov_0.866667_g9347_i0 | PRJNA1215813 | 9427 | 253 | 0.866667 | 2.19266751 | Leptothrix cholodnii | 34029 | Bacteria | Bacteria | 202 | 2.15e-47 | NTclustered | gi|170774137|gb|CP001013.1| | 395495 | g9347 | i0 | 81.933 | 7.56916996047431 | 238 | 43 | 94 | 0 | 1 | 238 | 4438053 | 4437816 | Leptothrix cholodnii SP-6 chromosome, complete genome | blastn | 1915 | 202 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Leptothrix | Leptothrix cholodnii | ||
| 8698799 | 8698799 | PRJNA1215813_P_NODE_11807_length_244_cov_0.912281_g11727_i0 | PRJNA1215813 | 11807 | 244 | 0.912281 | 2.22596564 | Brucella | 234 | Bacteria | Bacteria | 444 | 3.11e-120 | NTclustered | gi|2293240145|gb|CP103345.1| | 529 | g11727 | i0 | 99.588 | 20.844262295082 | 243 | 1 | 99 | 0 | 1 | 243 | 876676 | 876918 | Brucella anthropi strain CGMCC 1.17299 chromosome 1, complete sequence | blastn | 5086 | 444 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 10535532 | 10535532 | PRJNA1215813_P_NODE_10229_length_250_cov_0.881356_g10149_i0 | PRJNA1215813 | 10229 | 250 | 0.881356 | 2.20339 | Brucella anthropi | 529 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1115993426|emb|LT671862.1| | 529 | g10149 | i0 | 100 | 8.016 | 250 | 0 | 100 | 0 | 1 | 250 | 1822396 | 1822147 | Ochrobactrum anthropi genome assembly, chromosome: II | blastn | 2004 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 10535614 | 10535614 | PRJNA1215813_P_NODE_4589_length_358_cov_1.094737_g4509_i0 | PRJNA1215813 | 4589 | 358 | 1.094737 | 3.91915846 | Wolbachia endosymbiont of Howardula sp. | 2916816 | Bacteria | Bacteria | 246 | 1.45e-60 | NTclustered | gi|2295614120|gb|CP092368.1| | 2916816 | g4509 | i0 | 80.818 | 13.5027932960894 | 318 | 57 | 88 | 4 | 43 | 358 | 184711 | 185026 | Wolbachia endosymbiont of Howardula sp. isolate HA_SPA chromosome, complete genome | blastn | 4834 | 246 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Wolbachia | Wolbachia endosymbiont of Howardula sp. | ||
| 11249152 | 11249152 | PRJNA1215813_P_NODE_11869_length_244_cov_0.912281_g11789_i0 | PRJNA1215813 | 11869 | 244 | 0.912281 | 2.22596564 | Limnobacter | 131079 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2591690181|dbj|AP028947.1| | 131080 | g11789 | i0 | 100 | 196.733606557377 | 244 | 0 | 100 | 0 | 1 | 244 | 509864 | 510107 | Limnobacter thiooxidans CS-K2 DNA, complete genome | blastn | 48003 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Limnobacter | Limnobacter thiooxidans | ||
| 11249155 | 11249155 | PRJNA1215813_P_NODE_12189_length_243_cov_0.917647_g12109_i0 | PRJNA1215813 | 12189 | 243 | 0.917647 | 2.22988221 | Methylobacterium | 407 | Bacteria | Bacteria | 95.3 | 3.59e-15 | NTclustered | gi|2731885816|gb|CP155000.1| | 107400 | g12109 | i0 | 100 | 2.50205761316872 | 51 | 0 | 21 | 0 | 193 | 243 | 2499244 | 2499294 | Methylobacterium fujisawaense strain C14 chromosome, complete genome | blastn | 608 | 95.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium fujisawaense | ||
| 11810372 | 11810372 | PRJNA1215813_P_NODE_11430_length_246_cov_0.901734_g11350_i0 | PRJNA1215813 | 11430 | 246 | 0.901734 | 2.21826564 | Acinetobacter bereziniae | 106648 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2301648672|gb|CP092085.1| | 106648 | g11350 | i0 | 100 | 12 | 246 | 0 | 100 | 0 | 1 | 246 | 2508516 | 2508761 | Acinetobacter bereziniae strain GD03393 chromosome | blastn | 2952 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter bereziniae | ||
| 12524510 | 12524510 | PRJNA1215813_P_NODE_7450_length_287_cov_1.757009_g7370_i0 | PRJNA1215813 | 7450 | 287 | 1.757009 | 5.04261583 | Alcaligenes | 507 | Bacteria | Bacteria | 483 | 7.94e-132 | NTclustered | gi|2422072251|gb|CP096916.1| | 511 | g7370 | i0 | 99.621 | 7.33797909407665 | 264 | 1 | 92 | 0 | 1 | 264 | 3764729 | 3764466 | Alcaligenes faecalis strain NY11312 chromosome, complete genome | blastn | 2106 | 483 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Alcaligenes | Alcaligenes faecalis | ||
| 13085360 | 13085360 | PRJNA1215813_P_NODE_11871_length_244_cov_0.912281_g11791_i0 | PRJNA1215813 | 11871 | 244 | 0.912281 | 2.22596564 | Hydrogenophaga sp. BPS33 | 2651974 | Bacteria | Bacteria | 292 | 1.19e-74 | NTclustered | gi|1796319018|gb|CP044549.1| | 2651974 | g11791 | i0 | 96.591 | 71.5 | 176 | 6 | 72 | 0 | 66 | 241 | 1788450 | 1788625 | Hydrogenophaga sp. BPS33 chromosome, complete genome | blastn | 17446 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga sp. BPS33 | ||
| 13085457 | 13085457 | PRJNA1215813_P_NODE_6251_length_312_cov_1.305439_g6171_i0 | PRJNA1215813 | 6251 | 312 | 1.305439 | 4.07296968 | Limnohabitans sp. INBF002 | 2986280 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2378372671|dbj|AP027055.1| | 2986280 | g6171 | i0 | 100 | 0.0897435897435897 | 28 | 0 | 9 | 0 | 222 | 249 | 1117124 | 1117151 | Limnohabitans sp. INBF002 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Limnohabitans | Limnohabitans sp. INBF002 | ||
| 13799182 | 13799182 | PRJNA1215813_P_NODE_10251_length_250_cov_0.881356_g10171_i0 | PRJNA1215813 | 10251 | 250 | 0.881356 | 2.20339 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2653344983|gb|CP142438.1| | 562 | g10171 | i0 | 100 | 157.876 | 250 | 0 | 100 | 0 | 1 | 250 | 3293964 | 3294213 | Escherichia coli strain Case 2 chromosome, complete genome | blastn | 39469 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 14360719 | 14360719 | PRJNA1215813_P_NODE_1672_length_576_cov_1.693837_g1594_i0 | PRJNA1215813 | 1672 | 576 | 1.693837 | 9.75650112 | Halomonas huangheensis | 1178482 | Bacteria | Bacteria | 54.7 | 0.016 | NTclustered | gi|947268313|gb|CP013106.1| | 1178482 | g1594 | i0 | 100 | 0.0503472222222222 | 29 | 0 | 5 | 0 | 334 | 362 | 2328521 | 2328493 | Halomonas huangheensis strain BJGMM-B45 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Halomonas | Halomonas huangheensis | ||
| 14360843 | 14360843 | PRJNA1215813_P_NODE_9292_length_253_cov_0.866667_g9212_i0 | PRJNA1215813 | 9292 | 253 | 0.866667 | 2.19266751 | Piscinibacter gummiphilus | 946333 | Bacteria | Bacteria | 278 | 3.48e-70 | NTclustered | gi|2592591388|gb|CP136336.1| | 946333 | g9212 | i0 | 89.498 | 87.399209486166 | 219 | 23 | 87 | 0 | 35 | 253 | 2922722 | 2922504 | Piscinibacter gummiphilus strain SBD 7-3 chromosome, complete genome | blastn | 22112 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Piscinibacter | Piscinibacter gummiphilus | ||
| 15073407 | 15073407 | PRJNA1215813_P_NODE_10572_length_249_cov_0.886364_g10492_i0 | PRJNA1215813 | 10572 | 249 | 0.886364 | 2.20704636 | Brucella | 234 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1929917788|gb|CP064062.1| | 529 | g10492 | i0 | 100 | 11 | 249 | 0 | 100 | 0 | 1 | 249 | 477141 | 476893 | Brucella anthropi strain PBO chromosome 1, complete sequence | blastn | 2739 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 15634651 | 15634651 | PRJNA1215813_P_NODE_12473_length_242_cov_0.923077_g12393_i0 | PRJNA1215813 | 12473 | 242 | 0.923077 | 2.23384634 | Hypericibacter adhaerens | 2602016 | Bacteria | Bacteria | 165 | 2.68e-36 | NTclustered | gi|1752962642|gb|CP042582.1| | 2602016 | g12393 | i0 | 80.751 | 81.7231404958678 | 213 | 39 | 88 | 2 | 31 | 242 | 2086493 | 2086282 | Hypericibacter adhaerens strain R5959 chromosome, complete genome | blastn | 19777 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodospirillales | Dongiaceae | Hypericibacter | Hypericibacter adhaerens | ||
| 16348310 | 16348310 | PRJNA1215813_P_NODE_8173_length_274_cov_1.920398_g8093_i0 | PRJNA1215813 | 8173 | 274 | 1.920398 | 5.26189052 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 161 | 4.01e-35 | NTclustered | gi|1638105436|gb|CP040017.1| | 864828 | g8093 | i0 | 77.737 | 6.36496350364964 | 274 | 53 | 99 | 7 | 5 | 274 | 4717663 | 4717394 | Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete genome | blastn | 1744 | 161 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Pseudoduganella | Pseudoduganella umbonata | ||
| 17623558 | 17623558 | PRJNA1215813_P_NODE_10434_length_249_cov_0.886364_g10354_i0 | PRJNA1215813 | 10434 | 249 | 0.886364 | 2.20704636 | Acinetobacter | 469 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2216409579|gb|CP065052.1| | 470 | g10354 | i0 | 100 | 79.4698795180723 | 249 | 0 | 100 | 0 | 1 | 249 | 64752 | 64504 | Acinetobacter baumannii strain 2016GDAB1 plasmid p5637, complete sequence | blastn | 19788 | 460 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Acinetobacter | Acinetobacter baumannii | ||
| 17623566 | 17623566 | PRJNA1215813_P_NODE_1234_length_656_cov_17.084048_g1157_i0 | PRJNA1215813 | 1234 | 656 | 17.084048 | 112.07135488 | Aeromonas | 642 | Bacteria | Bacteria | 1088 | 0 | NTclustered | gi|2489111879|gb|CP121794.1| | 648 | g1157 | i0 | 98.852 | 760.234756097561 | 610 | 7 | 93 | 0 | 1 | 610 | 2021 | 1412 | Aeromonas caviae strain FIONA 16800 chromosome, complete genome | blastn | 498714 | 1088 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | Aeromonas caviae | ||
| 17623584 | 17623584 | PRJNA1215813_P_NODE_9014_length_258_cov_1.264865_g8934_i0 | PRJNA1215813 | 9014 | 258 | 1.264865 | 3.2633517 | Vibrio | 662 | Bacteria | Bacteria | 477 | 3.2699999999999985e-130 | NTclustered | gi|1858855023|gb|CP053808.1| | 666 | g8934 | i0 | 100 | 892.019379844961 | 258 | 0 | 100 | 0 | 1 | 258 | 48382 | 48639 | Vibrio cholerae strain SP7G chromosome 1, complete sequence | blastn | 230141 | 477 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Vibrionales | Vibrionaceae | Vibrio | Vibrio cholerae | ||
| 18897330 | 18897330 | PRJNA1215813_P_NODE_475_length_971_cov_5.488864_g425_i0 | PRJNA1215813 | 475 | 971 | 5.488864 | 53.29686944 | Herbaspirillum | 963 | Bacteria | Bacteria | 1722 | 0 | NTclustered | gi|1510310152|gb|CP024996.1| | 80842 | g425 | i0 | 98.661 | 446.044284243048 | 971 | 13 | 100 | 0 | 1 | 971 | 549887 | 550857 | Herbaspirillum rubrisubalbicans strain DSM 11543 chromosome, complete genome | blastn | 433109 | 1733 | 0.993652625504905 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum rubrisubalbicans | ||
| 20733271 | 20733271 | PRJNA1215813_P_NODE_8797_length_262_cov_1.328042_g8717_i0 | PRJNA1215813 | 8797 | 262 | 1.328042 | 3.47947004 | Bosea sp. PAMC 26642 | 1792307 | Bacteria | Bacteria | 279 | 1.01e-70 | NTclustered | gi|996001510|gb|CP014301.1| | 1792307 | g8717 | i0 | 95.455 | 7.46564885496183 | 176 | 7 | 67 | 1 | 88 | 262 | 1824806 | 1824981 | Bosea sp. PAMC 26642 chromosome, complete genome | blastn | 1956 | 279 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Boseaceae | Bosea | Bosea sp. PAMC 26642 | ||
| 21447695 | 21447695 | PRJNA1215813_P_NODE_12397_length_242_cov_0.923077_g12317_i0 | PRJNA1215813 | 12397 | 242 | 0.923077 | 2.23384634 | Brucella | 234 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|2293240145|gb|CP103345.1| | 529 | g12317 | i0 | 99.587 | 45.9090909090909 | 242 | 1 | 100 | 0 | 1 | 242 | 2622357 | 2622598 | Brucella anthropi strain CGMCC 1.17299 chromosome 1, complete sequence | blastn | 11110 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 22008386 | 22008386 | PRJNA1215813_P_NODE_11058_length_247_cov_0.896552_g10978_i0 | PRJNA1215813 | 11058 | 247 | 0.896552 | 2.21448344 | Cupriavidus pauculus | 82633 | Bacteria | Bacteria | 231 | 2.6699999999999997e-56 | NTclustered | gi|2221603161|gb|CP084279.1| | 82633 | g10978 | i0 | 99.219 | 6.61133603238866 | 128 | 1 | 52 | 0 | 120 | 247 | 2019031 | 2019158 | Cupriavidus pauculus strain BHJ32i chromosome 1, complete sequence | blastn | 1633 | 231 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Cupriavidus | Cupriavidus pauculus | ||
| 22722729 | 22722729 | PRJNA1215813_P_NODE_10718_length_248_cov_0.891429_g10638_i0 | PRJNA1215813 | 10718 | 248 | 0.891429 | 2.21074392 | Methylobacterium | 407 | Bacteria | Bacteria | 457 | 4.07e-124 | NTclustered | gi|170652972|gb|CP001001.1| | 426355 | g10638 | i0 | 100 | 10.875 | 247 | 0 | 99 | 0 | 2 | 248 | 38144 | 37898 | Methylobacterium radiotolerans JCM 2831, complete genome | blastn | 2697 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium radiotolerans | ||
| 24557950 | 24557950 | PRJNA1215813_P_NODE_5120_length_340_cov_2.337079_g5040_i0 | PRJNA1215813 | 5120 | 340 | 2.337079 | 7.9460686 | Haemophilus influenzae | 727 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2891654656|gb|CP095981.1| | 727 | g5040 | i0 | 100 | 0.176470588235294 | 30 | 0 | 9 | 0 | 230 | 259 | 317808 | 317779 | Haemophilus influenzae strain 26.3-27 chromosome, complete genome | blastn | 60 | 56.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pasteurellales | Pasteurellaceae | Haemophilus | Haemophilus influenzae | ||
| 24557963 | 24557963 | PRJNA1215813_P_NODE_6140_length_315_cov_1.289256_g6060_i0 | PRJNA1215813 | 6140 | 315 | 1.289256 | 4.0611564 | Halomonas sp. Y3 | 2956797 | Bacteria | Bacteria | 58.4 | 6.34e-4 | NTclustered | gi|2263912048|gb|CP099975.1| | 2956797 | g6060 | i0 | 97.059 | 0.107936507936508 | 34 | 1 | 11 | 0 | 208 | 241 | 2737021 | 2736988 | Halomonas sp. Y3 chromosome, complete genome | blastn | 34 | 58.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Oceanospirillales | Halomonadaceae | Halomonas | Halomonas sp. Y3 | ||
| 24557992 | 24557992 | PRJNA1215813_P_NODE_7780_length_282_cov_0.784689_g7700_i0 | PRJNA1215813 | 7780 | 282 | 0.784689 | 2.21282298 | Rheinheimera sp. F8 | 1763998 | Bacteria | Bacteria | 494 | 3.6e-135 | NTclustered | gi|975021511|gb|CP013656.1| | 1763998 | g7700 | i0 | 98.227 | 800.386524822695 | 282 | 5 | 100 | 0 | 1 | 282 | 418015 | 417734 | Rheinheimera sp. F8 genome | blastn | 225709 | 494 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Chromatiales | Chromatiaceae | Rheinheimera | Rheinheimera sp. F8 | ||
| 24558004 | 24558004 | PRJNA1215813_P_NODE_8660_length_265_cov_0.838542_g8580_i0 | PRJNA1215813 | 8660 | 265 | 0.838542 | 2.2221363 | Sphingomonas donggukensis | 2949093 | Bacteria | Bacteria | 457 | 4.39e-124 | NTclustered | gi|2250064321|gb|CP098401.1| | 2949093 | g8580 | i0 | 97.736 | 191.041509433962 | 265 | 6 | 100 | 0 | 1 | 265 | 2271984 | 2271720 | Sphingomonas donggukensis strain RMG20 chromosome, complete genome | blastn | 50626 | 457 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas donggukensis | ||
| 25271976 | 25271976 | PRJNA1215813_P_NODE_10260_length_250_cov_0.881356_g10180_i0 | PRJNA1215813 | 10260 | 250 | 0.881356 | 2.20339 | Brucella | 234 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1761803076|gb|CP044970.1| | 529 | g10180 | i0 | 100 | 18.988 | 250 | 0 | 100 | 0 | 1 | 250 | 1399986 | 1400235 | Brucella anthropi strain T16R-87 chromosome 1, complete sequence | blastn | 4747 | 462 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi | ||
| 25271977 | 25271977 | PRJNA1215813_P_NODE_10540_length_249_cov_0.886364_g10460_i0 | PRJNA1215813 | 10540 | 249 | 0.886364 | 2.20704636 | root | 1 | Root_unresolved | Root_unresolved | 387 | 5.439999999999998e-103 | NTclustered | gi|1287461093|dbj|LC318058.1| | 562 | g10460 | i0 | 100 | 84.6787148594377 | 209 | 0 | 84 | 0 | 41 | 249 | 2881 | 2673 | Escherichia coli plasmid p41-3 DNA, strain: QD1-5-9, contig: p41-3_contig_009 | blastn | 21085 | 390 | 0.992307692307692 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25271980 | 25271980 | PRJNA1215813_P_NODE_11020_length_247_cov_0.896552_g10940_i0 | PRJNA1215813 | 11020 | 247 | 0.896552 | 2.21448344 | Ralstonia | 48736 | Bacteria | Bacteria | 451 | 1.88e-122 | NTclustered | gi|2209821455|gb|CP093303.1| | 190721 | g10940 | i0 | 99.595 | 97.0161943319838 | 247 | 1 | 100 | 0 | 1 | 247 | 475247 | 475493 | Ralstonia insidiosa strain 15-1563-3 chromosome 1, complete sequence | blastn | 23963 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia insidiosa | ||
| 25272000 | 25272000 | PRJNA1215813_P_NODE_8540_length_267_cov_1.340206_g8460_i0 | PRJNA1215813 | 8540 | 267 | 1.340206 | 3.57835002 | Brucella | 234 | Bacteria | Bacteria | 477 | 3.3999999999999993e-130 | NTclustered | gi|2293240145|gb|CP103345.1| | 529 | g8460 | i0 | 98.876 | 13 | 267 | 3 | 100 | 0 | 1 | 267 | 970020 | 969754 | Brucella anthropi strain CGMCC 1.17299 chromosome 1, complete sequence | blastn | 3471 | 477 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella anthropi |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;