RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1215813 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7985245 7985245 PRJNA1215813_P_NODE_9247_length_253_cov_1.644444_g9167_i0 PRJNA1215813 9247 253 1.644444 4.16044332 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 1.76e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g9167 i0 100 14.7944664031621 39 0 15 0 61 99 1633 1595 Monotoplana cf. diorchis partial 28S rRNA gene blastn 3743 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis
9259804 9259804 PRJNA1215813_P_NODE_8828_length_261_cov_2.489362_g8748_i0 PRJNA1215813 8828 261 2.489362 6.49723482 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 460 3.3399999999999995e-125   NTclustered gi|68479954|gb|DQ076149.1| 6182 g8748 i0 98.467 1 261 4 100 0 1 261 41 301 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 261 460 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;