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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4158833 4158833 PRJNA1215813_P_NODE_8264_length_272_cov_1.648241_g8184_i0 PRJNA1215813 8264 272 1.648241 4.48321552 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 3.01e-51   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8184 i0 80.882 98.9338235294118 272 52 100 0 1 272 149 420 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 26910 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10535578 10535578 PRJNA1215813_P_NODE_2329_length_488_cov_1.918072_g2249_i0 PRJNA1215813 2329 488 1.918072 9.36019136 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 255 3.38e-63   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g2249 i0 81.329 63.2377049180328 316 58 65 1 48 362 422 107 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30860 255 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13085400 13085400 PRJNA1215813_P_NODE_2971_length_439_cov_1.224044_g2891_i0 PRJNA1215813 2971 439 1.224044 5.37355316 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 292 2.3e-74   NTclustered gi|927486|emb|X79205.1| 5755 g2891 i0 81.117 64.3371298405467 376 61 84 6 3 370 773 1146 A.castellanii mRNA for methionine adenosyltransferase blastn 28244 292 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14360760 14360760 PRJNA1215813_P_NODE_412_length_1029_cov_105.780335_g349_i1 PRJNA1215813 412 1029 105.780335 1088.47964715 Vannella sp. GERL14 1002217 Discosea other_Eukaryota 673 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g349 i1 95.54 39.8726919339164 426 9 41 6 2 418 427 3 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 41029 673 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
15634655 15634655 PRJNA1215813_P_NODE_1333_length_636_cov_1.944938_g1256_i0 PRJNA1215813 1333 636 1.944938 12.36980568 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 372 4.27e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g1256 i0 78.109 77.0911949685535 603 120 94 11 39 635 607 11 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 49030 372 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19457805 19457805 PRJNA1215813_P_NODE_396_length_1052_cov_103.213483_g349_i0 PRJNA1215813 396 1052 103.213483 1085.80584116 Vannella sp. GERL14 1002217 Discosea other_Eukaryota 673 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g349 i0 95.54 39.0009505703422 426 9 40 6 2 418 427 3 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 41029 673 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
22008446 22008446 PRJNA1215813_P_NODE_3478_length_407_cov_5.517964_g3398_i0 PRJNA1215813 3478 407 5.517964 22.45811348 Vannella septentrionalis 197531 Discosea other_Eukaryota 582 1.1199999999999999e-161   NTclustered gi|300078499|gb|GU001161.1| 197531 g3398 i0 92.326 94.4398034398034 417 20 100 9 1 407 3414 3828 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 38437 582 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
22008547 22008547 PRJNA1215813_P_NODE_9778_length_252_cov_0.871508_g9698_i0 PRJNA1215813 9778 252 0.871508 2.19620016 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 6e-43   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g9698 i0 81.176 1.20634920634921 255 28 94 5 16 251 944 691 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 304 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;