RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1215813 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9973897 9973897 PRJNA1215813_P_NODE_10628_length_248_cov_4.502857_g10548_i0 PRJNA1215813 10628 248 4.502857 11.16708536 Metazoa 33208 Cnidaria other_Eukaryota 126 1.2999999999999998e-24   NTclustered gi|605060084|gb|KF874224.1| 109801 g10548 i0 86.441 49.6290322580645 118 12 47 4 130 246 233 347 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12308 126 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
15634750 15634750 PRJNA1215813_P_NODE_6733_length_302_cov_1.353712_g6653_i0 PRJNA1215813 6733 302 1.353712 4.08821024 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2917940740|emb|OZ237567.1| 6108 g6653 i0 100 0.0960264900662252 29 0 10 0 131 159 2788560 2788588 Anemonia sulcata genome assembly, chromosome: 13 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15634793 15634793 PRJNA1215813_P_NODE_9873_length_251_cov_0.876404_g9793_i0 PRJNA1215813 9873 251 0.876404 2.19977404 Anemonia sulcata 6108 Cnidaria other_Eukaryota 67.6 8.12e-7   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g9793 i0 100 11.6693227091633 36 0 14 0 191 226 1977879 1977914 Anemonia sulcata genome assembly, chromosome: 14 blastn 2929 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;