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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA1215813 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
331622 331622 PRJNA1215813_P_NODE_2041_length_519_cov_1.921525_g1961_i0 PRJNA1215813 2041 519 1.921525 9.97271475 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 948 0   NTclustered gi|300676719|gb|GQ377693.1| 151077 g1961 i0 99.615 58.5529865125241 519 2 100 0 1 519 536 18 Chilodonella uncinata gcr5-like mRNA, partial sequence blastn 30389 948 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
4158806 4158806 PRJNA1215813_P_NODE_6304_length_311_cov_1.310924_g6224_i0 PRJNA1215813 6304 311 1.310924 4.07697364 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 497 3.11e-136   NTclustered gi|2651357791|gb|PP174306.1| 41631 g6224 i0 95.498 86.2057877813505 311 14 100 0 1 311 3452 3762 Colpoda sp. isolate JGP15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 26810 497 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
4158830 4158830 PRJNA1215813_P_NODE_8104_length_275_cov_2.316832_g8024_i0 PRJNA1215813 8104 275 2.316832 6.371288 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 508 1.2499999999999999e-139   NTclustered gi|347439301|gb|JN111999.1| 151077 g8024 i0 100 13.2836363636364 275 0 100 0 1 275 525 251 Chilodonella uncinata strain USA_WH actin gene, partial cds; macronuclear blastn 3653 508 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6709600 6709600 PRJNA1215813_P_NODE_5546_length_329_cov_4.539062_g5466_i0 PRJNA1215813 5546 329 4.539062 14.93351398 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 608 1.4599999999999995e-169   NTclustered gi|2223186636|gb|MW310239.1| 151077 g5466 i0 100 95.3677811550152 329 0 100 0 1 329 12 340 Chilodonella uncinata isolate 20200709 small subunit ribosomal RNA gene, partial sequence blastn 31376 608 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
11810478 11810478 PRJNA1215813_P_NODE_6510_length_307_cov_1.000000_g6430_i0 PRJNA1215813 6510 307 1 3.07 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 82.4 3.65e-11   NTclustered gi|471232437|ref|XM_004037270.1| 5932 g6430 i0 92.857 0.182410423452769 56 4 18 0 205 260 101 46 Ichthyophthirius multifiliis hypothetical protein (IMG5_056040) mRNA, complete cds blastn 56 82.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
12524504 12524504 PRJNA1215813_P_NODE_3710_length_395_cov_6.487578_g3630_i0 PRJNA1215813 3710 395 6.487578 25.6259331 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 316 1.21e-81   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3630 i0 97.814 51.9670886075949 183 4 46 0 213 395 3082 2900 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20527 316 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
12524509 12524509 PRJNA1215813_P_NODE_7110_length_293_cov_1.418182_g7030_i0 PRJNA1215813 7110 293 1.418182 4.15527326 Colpoda 5979 SAR_Eukaryotes SAR_Eukaryotes 531 2.86e-146   NTclustered gi|1442777303|gb|MH715344.1| 41631 g7030 i0 99.317 100.194539249147 293 2 100 0 1 293 10 302 Colpoda sp. isolate HSP-001 small subunit ribosomal RNA gene, partial sequence blastn 29357 536 0.990671641791045 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
13085403 13085403 PRJNA1215813_P_NODE_3091_length_430_cov_2.061625_g3011_i0 PRJNA1215813 3091 430 2.061625 8.8649875 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 795 0   NTclustered gi|301014695|gb|GQ377692.1| 151077 g3011 i0 100 18.506976744186 430 0 100 0 1 430 17 446 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 7958 795 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
15073411 15073411 PRJNA1215813_P_NODE_1292_length_643_cov_14.478947_g1215_i0 PRJNA1215813 1292 643 14.478947 93.09962921 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1037 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1215 i0 95.794 62.8786936236392 642 27 99 0 1 642 651 10 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 40431 1037 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18183426 18183426 PRJNA1215813_P_NODE_995_length_720_cov_2.384853_g922_i0 PRJNA1215813 995 720 2.384853 17.1709416 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 1319 0   NTclustered gi|110644972|gb|DQ665918.1| 151077 g922 i0 99.722 99.1833333333333 720 2 100 0 1 720 723 4 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 71412 1319 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19457826 19457826 PRJNA1215813_P_NODE_5516_length_330_cov_1.509728_g5436_i0 PRJNA1215813 5516 330 1.509728 4.9821024 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 610 4.09e-170   NTclustered gi|300521444|gb|GQ377690.1| 151077 g5436 i0 100 4.13333333333333 330 0 100 0 1 330 286 615 Chilodonella uncinata 14-3-3 protein-like mRNA, partial sequence blastn 1364 610 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19457887 19457887 PRJNA1215813_P_NODE_9256_length_253_cov_1.300000_g9176_i0 PRJNA1215813 9256 253 1.3 3.289 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 448 2.5099999999999998e-121   NTclustered gi|110645063|gb|DQ665311.1| 151077 g9176 i0 100 48.0830039525692 242 0 96 0 1 242 964 1205 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 12165 448 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23283938 23283938 PRJNA1215813_P_NODE_3359_length_414_cov_1.829912_g3279_i0 PRJNA1215813 3359 414 1.829912 7.57583568 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 560 5.35e-155   NTclustered gi|21632109|gb|AY041125.1| 151077 g3279 i0 100 81.3840579710145 303 0 73 0 1 303 303 1 Chilodonella uncinata clone 5 alpha-tubulin gene, partial cds blastn 33693 560 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23997900 23997900 PRJNA1215813_P_NODE_10939_length_247_cov_2.241379_g10859_i0 PRJNA1215813 10939 247 2.241379 5.53620613 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 457 4.05e-124   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g10859 i0 100 100.380566801619 247 0 100 0 1 247 2803 2557 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 24794 457 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
24558001 24558001 PRJNA1215813_P_NODE_8360_length_270_cov_9.091371_g8280_i0 PRJNA1215813 8360 270 9.091371 24.5467017 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 483 7.409999999999998e-132   NTclustered gi|1389430803|gb|MH341631.1| 1938391 g8280 i0 98.889 100.625925925926 270 3 100 0 1 270 667 936 Chilodonella hexasticha strain C. hexasticha SC large subunit ribosomal RNA gene, partial sequence blastn 27169 483 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;