contig_metadata
41 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 331732 | 331732 | PRJNA1215813_P_NODE_7681_length_283_cov_1.690476_g7601_i0 | PRJNA1215813 | 7681 | 283 | 1.690476 | 4.78404708 | Hyperolius riggenbachi | 752182 | Chordata | Chordata | 54.7 | 0.007 | NTclustered | gi|2801465031|ref|XM_068249694.1| | 752182 | g7601 | i0 | 92.105 | 0.134275618374558 | 38 | 3 | 13 | 0 | 10 | 47 | 88 | 125 | PREDICTED: Hyperolius riggenbachi protein rtoA-like (LOC137528402), partial mRNA | blastn | 38 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Hyperoliidae | Hyperolius | Hyperolius riggenbachi | |
| 1606518 | 1606518 | PRJNA1215813_P_NODE_4162_length_375_cov_1.023179_g4082_i0 | PRJNA1215813 | 4162 | 375 | 1.023179 | 3.83692125 | Rattus norvegicus | 10116 | Chordata | Chordata | 691 | 0 | NTclustered | gi|55627|emb|V01222.1| | 10116 | g4082 | i0 | 100 | 94.3306666666667 | 374 | 0 | 99 | 0 | 2 | 375 | 1091 | 718 | Messenger RNA for rat preproalbumin | blastn | 35374 | 691 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 2882634 | 2882634 | PRJNA1215813_P_NODE_11463_length_246_cov_0.901734_g11383_i0 | PRJNA1215813 | 11463 | 246 | 0.901734 | 2.21826564 | Mus musculus | 10090 | Chordata | Chordata | 455 | 1.4500000000000002e-123 | NTclustered | gi|1907178177|ref|XM_006540696.4| | 10090 | g11383 | i0 | 100 | 33.1382113821138 | 246 | 0 | 100 | 0 | 1 | 246 | 2010 | 2255 | PREDICTED: Mus musculus nucleobindin 1 (Nucb1), transcript variant X1, mRNA | blastn | 8152 | 455 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5434920 | 5434920 | PRJNA1215813_P_NODE_10565_length_249_cov_0.886364_g10485_i0 | PRJNA1215813 | 10565 | 249 | 0.886364 | 2.20704636 | Mus musculus | 10090 | Chordata | Chordata | 52.8 | 0.023 | NTclustered | gi|67078736|gb|AC149217.4| | 10090 | g10485 | i0 | 96.774 | 0.248995983935743 | 31 | 1 | 12 | 0 | 107 | 137 | 201374 | 201404 | Mus musculus BAC clone RP24-147O12 from chromosome 7, complete sequence | blastn | 62 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5434933 | 5434933 | PRJNA1215813_P_NODE_11265_length_246_cov_0.901734_g11185_i0 | PRJNA1215813 | 11265 | 246 | 0.901734 | 2.21826564 | Rattus norvegicus | 10116 | Chordata | Chordata | 449 | 6.74e-122 | NTclustered | gi|2678913968|ref|XM_063278272.1| | 10116 | g11185 | i0 | 99.593 | 11.760162601626 | 246 | 1 | 100 | 0 | 1 | 246 | 1715 | 1470 | PREDICTED: Rattus norvegicus microtubule-associated protein 1 light chain 3 beta (Map1lc3b), transcript variant X1, mRNA | blastn | 2893 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6709516 | 6709516 | PRJNA1215813_P_NODE_11026_length_247_cov_0.896552_g10946_i0 | PRJNA1215813 | 11026 | 247 | 0.896552 | 2.21448344 | Rattus norvegicus | 10116 | Chordata | Chordata | 446 | 8.759999999999998e-121 | NTclustered | gi|2191823147|ref|NM_001401367.1| | 10116 | g10946 | i0 | 99.194 | 6.03238866396761 | 248 | 1 | 100 | 1 | 1 | 247 | 729 | 482 | Rattus norvegicus dermatopontin (Dpt), transcript variant 2, mRNA | blastn | 1490 | 446 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6709522 | 6709522 | PRJNA1215813_P_NODE_11586_length_245_cov_0.906977_g11506_i0 | PRJNA1215813 | 11586 | 245 | 0.906977 | 2.22209365 | Mus musculus | 10090 | Chordata | Chordata | 453 | 5.1900000000000006e-123 | NTclustered | gi|254939525|ref|NM_021360.4| | 10090 | g11506 | i0 | 100 | 98.9632653061225 | 245 | 0 | 100 | 0 | 1 | 245 | 2342 | 2098 | Mus musculus neuralized E3 ubiquitin protein ligase 1A (Neurl1a), transcript variant 1, mRNA | blastn | 24246 | 453 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7985105 | 7985105 | PRJNA1215813_P_NODE_12227_length_243_cov_0.917647_g12147_i0 | PRJNA1215813 | 12227 | 243 | 0.917647 | 2.22988221 | Rattus norvegicus | 10116 | Chordata | Chordata | 449 | 6.65e-122 | NTclustered | gi|117935063|ref|NM_022922.2| | 10116 | g12147 | i0 | 100 | 97.2921810699588 | 243 | 0 | 100 | 0 | 1 | 243 | 726 | 968 | Rattus norvegicus triosephosphate isomerase 1 (Tpi1), mRNA | blastn | 23642 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7985149 | 7985149 | PRJNA1215813_P_NODE_3147_length_427_cov_1.542373_g3067_i0 | PRJNA1215813 | 3147 | 427 | 1.542373 | 6.58593271 | Cairina moschata | 8855 | Chordata | Chordata | 52.8 | 0.041 | NTclustered | gi|2921976312|gb|CP130421.1| | 8855 | g3067 | i0 | 100 | 0.0655737704918033 | 28 | 0 | 7 | 0 | 288 | 315 | 28827624 | 28827651 | Cairina moschata breed yongchun chromosome 6 | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Anseriformes | Anatidae | Cairina | Cairina moschata | |
| 7985177 | 7985177 | PRJNA1215813_P_NODE_5007_length_344_cov_1.151292_g4927_i0 | PRJNA1215813 | 5007 | 344 | 1.151292 | 3.96044448 | Xenopus laevis | 8355 | Chordata | Chordata | 54.7 | 0.009 | NTclustered | gi|2038316750|ref|XM_041577250.1| | 8355 | g4927 | i0 | 100 | 0.0843023255813953 | 29 | 0 | 8 | 0 | 29 | 57 | 703 | 731 | PREDICTED: Xenopus laevis collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) L homeolog (col3a1.L), mRNA | blastn | 29 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Pipidae | Xenopus | Xenopus laevis | |
| 7985252 | 7985252 | PRJNA1215813_P_NODE_9587_length_252_cov_0.871508_g9507_i0 | PRJNA1215813 | 9587 | 252 | 0.871508 | 2.19620016 | Mus musculus | 10090 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|1907067630|ref|XM_017319175.3| | 10090 | g9507 | i0 | 100 | 99.2103174603175 | 252 | 0 | 100 | 0 | 1 | 252 | 8309 | 8058 | PREDICTED: Mus musculus microtubule-associated protein 2 (Map2), transcript variant X18, mRNA | blastn | 25001 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8698802 | 8698802 | PRJNA1215813_P_NODE_2227_length_498_cov_1.282353_g2147_i0 | PRJNA1215813 | 2227 | 498 | 1.282353 | 6.38611794 | Opisthokonta | 33154 | Chordata | Chordata | 54.7 | 0.014 | NTclustered | gi|2805737341|emb|OZ078445.1| | 7748 | g2147 | i0 | 96.875 | 0.251004016064257 | 32 | 1 | 6 | 0 | 463 | 494 | 6860161 | 6860130 | Lampetra fluviatilis genome assembly, chromosome: 42 | blastn | 125 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra fluviatilis | |
| 8698817 | 8698817 | PRJNA1215813_P_NODE_7627_length_284_cov_2.218009_g7547_i0 | PRJNA1215813 | 7627 | 284 | 2.218009 | 6.29914556 | Mus | 10088 | Chordata | Chordata | 525 | 1.2899999999999994e-144 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g7547 | i0 | 100 | 100 | 284 | 0 | 100 | 0 | 1 | 284 | 2790 | 3073 | Mus musculus strain ME mitochondrion, complete genome | blastn | 28400 | 525 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8698818 | 8698818 | PRJNA1215813_P_NODE_8647_length_265_cov_1.218750_g8567_i0 | PRJNA1215813 | 8647 | 265 | 1.21875 | 3.2296875 | Mus | 10088 | Chordata | Chordata | 490 | 4.3299999999999986e-134 | NTclustered | gi|74222860|dbj|AK171158.1| | 10090 | g8567 | i0 | 100 | 55.4528301886792 | 265 | 0 | 100 | 0 | 1 | 265 | 634 | 898 | Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630228I12 product:secreted phosphoprotein 1, full insert sequence | blastn | 14695 | 490 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 9259817 | 9259817 | PRJNA1215813_P_NODE_9788_length_251_cov_2.629213_g9708_i0 | PRJNA1215813 | 9788 | 251 | 2.629213 | 6.59932463 | Spinus spinus | 160760 | Chordata | Chordata | 54.7 | 0.006 | NTclustered | gi|2917663466|emb|OZ228753.1| | 160760 | g9708 | i0 | 94.444 | 0.286852589641434 | 36 | 1 | 14 | 1 | 14 | 48 | 37205122 | 37205157 | Spinus spinus genome assembly, chromosome: 5 | blastn | 72 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Spinus | Spinus spinus | |
| 9973915 | 9973915 | PRJNA1215813_P_NODE_828_length_771_cov_2.885387_g762_i0 | PRJNA1215813 | 828 | 771 | 2.885387 | 22.24633377 | Mus | 10088 | Chordata | Chordata | 1424 | 0 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g762 | i0 | 100 | 99.9987029831388 | 771 | 0 | 100 | 0 | 1 | 771 | 2608 | 1838 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 77099 | 1424 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 10535649 | 10535649 | PRJNA1215813_P_NODE_7189_length_291_cov_2.596330_g7109_i0 | PRJNA1215813 | 7189 | 291 | 2.59633 | 7.5553203 | Hyperolius riggenbachi | 752182 | Chordata | Chordata | 148 | 3.3399999999999993e-31 | NTclustered | gi|2801423572|ref|XM_068277925.1| | 752182 | g7109 | i0 | 84.667 | 2.61855670103093 | 150 | 21 | 51 | 2 | 52 | 200 | 1308 | 1456 | PREDICTED: Hyperolius riggenbachi eukaryotic translation termination factor 1 (ETF1), mRNA | blastn | 762 | 148 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Amphibia | Anura | Hyperoliidae | Hyperolius | Hyperolius riggenbachi | |
| 11810412 | 11810412 | PRJNA1215813_P_NODE_2370_length_484_cov_1.895377_g2290_i0 | PRJNA1215813 | 2370 | 484 | 1.895377 | 9.17362468 | Sphaerodactylus townsendi | 933632 | Chordata | Chordata | 235 | 4.36e-57 | NTclustered | gi|2247554561|ref|XM_048510801.1| | 933632 | g2290 | i0 | 79.023 | 32.3904958677686 | 348 | 69 | 71 | 4 | 139 | 484 | 712 | 367 | PREDICTED: Sphaerodactylus townsendi RAB5A, member RAS oncogene family (RAB5A), transcript variant X2, mRNA | blastn | 15677 | 235 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Sphaerodactylidae | Sphaerodactylus | Sphaerodactylus townsendi | |
| 11810517 | 11810517 | PRJNA1215813_P_NODE_9710_length_252_cov_0.871508_g9630_i0 | PRJNA1215813 | 9710 | 252 | 0.871508 | 2.19620016 | Perognathus longimembris | 38669 | Chordata | Chordata | 187 | 6e-43 | NTclustered | gi|2240534328|ref|XM_048349392.1| | 214514 | g9630 | i0 | 80.408 | 17.3095238095238 | 245 | 48 | 97 | 0 | 7 | 251 | 386 | 630 | PREDICTED: Perognathus longimembris pacificus Rac family small GTPase 2 (Rac2), mRNA | blastn | 4362 | 187 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Heteromyidae | Perognathus | Perognathus longimembris | |
| 13085369 | 13085369 | PRJNA1215813_P_NODE_12411_length_242_cov_0.923077_g12331_i0 | PRJNA1215813 | 12411 | 242 | 0.923077 | 2.23384634 | Mus musculus | 10090 | Chordata | Chordata | 448 | 2.3799999999999995e-121 | NTclustered | gi|78486656|gb|AC162034.6| | 10090 | g12331 | i0 | 100 | 30.4917355371901 | 242 | 0 | 100 | 0 | 1 | 242 | 7941 | 7700 | Mus musculus chromosome 7, clone RP23-285B12, complete sequence | blastn | 7379 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14360763 | 14360763 | PRJNA1215813_P_NODE_4192_length_373_cov_2.173333_g4112_i0 | PRJNA1215813 | 4192 | 373 | 2.173333 | 8.10653209 | Ciona intestinalis | 7719 | Chordata | Chordata | 364 | 4.01e-96 | NTclustered | gi|1494783678|ref|XM_009862731.3| | 7719 | g4112 | i0 | 84.906 | 184.930294906166 | 371 | 44 | 98 | 12 | 2 | 366 | 2062 | 2426 | PREDICTED: Ciona intestinalis polyubiquitin-A (LOC100175058), transcript variant X1, mRNA | blastn | 68979 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Ascidiacea | Phlebobranchia | Cionidae | Ciona | Ciona intestinalis | |
| 15634635 | 15634635 | PRJNA1215813_P_NODE_11433_length_246_cov_0.901734_g11353_i0 | PRJNA1215813 | 11433 | 246 | 0.901734 | 2.21826564 | Mus musculus | 10090 | Chordata | Chordata | 449 | 6.74e-122 | NTclustered | gi|354792937|gb|JN957438.1| | 10090 | g11353 | i0 | 99.593 | 3 | 246 | 1 | 100 | 0 | 1 | 246 | 13443 | 13688 | Mus musculus targeted non-conditional, lacZ-tagged mutant allele Elovl2:tm1e(KOMP)Wtsi; transgenic | blastn | 738 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15634642 | 15634642 | PRJNA1215813_P_NODE_11953_length_244_cov_0.912281_g11873_i0 | PRJNA1215813 | 11953 | 244 | 0.912281 | 2.22596564 | Mus musculus | 10090 | Chordata | Chordata | 451 | 1.86e-122 | NTclustered | gi|2263045065|ref|NM_153178.5| | 10090 | g11873 | i0 | 100 | 8.0655737704918 | 244 | 0 | 100 | 0 | 1 | 244 | 9918 | 9675 | Mus musculus argonaute RISC catalytic subunit 2 (Ago2), mRNA | blastn | 1968 | 451 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15634643 | 15634643 | PRJNA1215813_P_NODE_11973_length_244_cov_0.912281_g11893_i0 | PRJNA1215813 | 11973 | 244 | 0.912281 | 2.22596564 | Mus musculus | 10090 | Chordata | Chordata | 451 | 1.86e-122 | NTclustered | gi|74213655|dbj|AK160103.1| | 10090 | g11893 | i0 | 100 | 69.8032786885246 | 244 | 0 | 100 | 0 | 1 | 244 | 1413 | 1170 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420049E19 product:pre-B-cell leukemia transcription factor interacting protein 1, full insert sequence | blastn | 17032 | 451 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16348303 | 16348303 | PRJNA1215813_P_NODE_5233_length_337_cov_2.037879_g5153_i0 | PRJNA1215813 | 5233 | 337 | 2.037879 | 6.86765223 | Mus | 10088 | Chordata | Chordata | 623 | 5.369999999999999e-174 | NTclustered | gi|1935582144|gb|MT937073.1| | 10090 | g5153 | i0 | 100 | 100 | 337 | 0 | 100 | 0 | 1 | 337 | 8973 | 8637 | Mus musculus breed tmt-TA C5024T mitochondrion | blastn | 33700 | 623 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16908846 | 16908846 | PRJNA1215813_P_NODE_11614_length_245_cov_0.906977_g11534_i0 | PRJNA1215813 | 11614 | 245 | 0.906977 | 2.22209365 | Mus musculus | 10090 | Chordata | Chordata | 448 | 2.41e-121 | NTclustered | gi|12805188|gb|BC002053.1| | 10090 | g11534 | i0 | 99.592 | 99.1877551020408 | 245 | 1 | 100 | 0 | 1 | 245 | 757 | 1001 | Mus musculus capping protein (actin filament) muscle Z-line, beta, mRNA (cDNA clone MGC:6082 IMAGE:3590980), complete cds | blastn | 24301 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16908855 | 16908855 | PRJNA1215813_P_NODE_12294_length_243_cov_0.917647_g12214_i0 | PRJNA1215813 | 12294 | 243 | 0.917647 | 2.22988221 | Mus musculus | 10090 | Chordata | Chordata | 449 | 6.65e-122 | NTclustered | gi|1143076939|ref|NM_001348087.1| | 10090 | g12214 | i0 | 100 | 46.2551440329218 | 243 | 0 | 100 | 0 | 1 | 243 | 295 | 53 | Mus musculus uridine monophosphate synthetase (Umps), transcript variant 2, mRNA | blastn | 11240 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17623559 | 17623559 | PRJNA1215813_P_NODE_10594_length_249_cov_0.886364_g10514_i0 | PRJNA1215813 | 10594 | 249 | 0.886364 | 2.20704636 | Mus | 10088 | Chordata | Chordata | 449 | 6.840000000000001e-122 | NTclustered | gi|1679814401|ref|XM_021176171.2| | 10089 | g10514 | i0 | 99.2 | 36.578313253012 | 250 | 1 | 100 | 1 | 1 | 249 | 1986 | 2235 | PREDICTED: Mus caroli secreted protein acidic and cysteine rich (Sparc), transcript variant X2, mRNA | blastn | 9108 | 453 | 0.991169977924945 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 17623578 | 17623578 | PRJNA1215813_P_NODE_6754_length_301_cov_2.052632_g6674_i0 | PRJNA1215813 | 6754 | 301 | 2.052632 | 6.17842232 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 187 | 7.36e-43 | NTclustered | gi|1952573568|ref|XM_038820424.1| | 7830 | g6674 | i0 | 79.323 | 15.1129568106312 | 266 | 55 | 88 | 0 | 1 | 266 | 363 | 628 | PREDICTED: Scyliorhinus canicula NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial (LOC119978637), transcript variant X3, mRNA | blastn | 4549 | 187 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Chondrichthyes | Carcharhiniformes | Scyliorhinidae | Scyliorhinus | Scyliorhinus canicula | |
| 18183256 | 18183256 | PRJNA1215813_P_NODE_10255_length_250_cov_0.881356_g10175_i0 | PRJNA1215813 | 10255 | 250 | 0.881356 | 2.20339 | Mus musculus | 10090 | Chordata | Chordata | 462 | 8.83e-126 | NTclustered | gi|26347226|dbj|AK078413.1| | 10090 | g10175 | i0 | 100 | 77.108 | 250 | 0 | 100 | 0 | 1 | 250 | 510 | 759 | Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720434K16 product:high mobility group nucleosomal binding domain 2, full insert sequence | blastn | 19277 | 462 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18183275 | 18183275 | PRJNA1215813_P_NODE_11915_length_244_cov_0.912281_g11835_i0 | PRJNA1215813 | 11915 | 244 | 0.912281 | 2.22596564 | Rattus norvegicus | 10116 | Chordata | Chordata | 448 | 2.4e-121 | NTclustered | gi|2678863368|ref|XM_006227832.5| | 10116 | g11835 | i0 | 100 | 25.9016393442623 | 242 | 0 | 99 | 0 | 3 | 244 | 8230 | 7989 | PREDICTED: Rattus norvegicus estrogen receptor 1 (Esr1), transcript variant X6, mRNA | blastn | 6320 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 18897324 | 18897324 | PRJNA1215813_P_NODE_10475_length_249_cov_0.886364_g10395_i0 | PRJNA1215813 | 10475 | 249 | 0.886364 | 2.20704636 | Petromyzontidae | 7746 | Chordata | Chordata | 52.8 | 0.023 | NTclustered | gi|2805739693|emb|OZ078467.1| | 7748 | g10395 | i0 | 96.875 | 0.465863453815261 | 32 | 0 | 13 | 1 | 130 | 161 | 6189882 | 6189852 | Lampetra fluviatilis genome assembly, chromosome: 64 | blastn | 116 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra fluviatilis | |
| 20733241 | 20733241 | PRJNA1215813_P_NODE_6597_length_305_cov_1.008621_g6517_i0 | PRJNA1215813 | 6597 | 305 | 1.008621 | 3.07629405 | Mus musculus | 10090 | Chordata | Chordata | 564 | 2.95e-156 | NTclustered | gi|1907186921|ref|XR_004934755.1| | 10090 | g6517 | i0 | 100 | 99.383606557376993 | 305 | 0 | 100 | 0 | 1 | 305 | 4523 | 4219 | PREDICTED: Mus musculus collagen, type IV, alpha 1 (Col4a1), transcript variant X1, misc_RNA | blastn | 30312 | 564 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 21447697 | 21447697 | PRJNA1215813_P_NODE_1697_length_571_cov_1.596386_g1619_i0 | PRJNA1215813 | 1697 | 571 | 1.596386 | 9.11536406 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 54.7 | 0.016 | NTclustered | gi|2558352247|ref|XM_058657948.1| | 9978 | g1619 | i0 | 100 | 0.108581436077058 | 29 | 0 | 5 | 0 | 312 | 340 | 994 | 966 | PREDICTED: Ochotona princeps coiled-coil and C2 domain containing 1A (CC2D1A), mRNA | blastn | 62 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Lagomorpha | Ochotonidae | Ochotona | Ochotona princeps | |
| 22008388 | 22008388 | PRJNA1215813_P_NODE_11158_length_247_cov_0.896552_g11078_i0 | PRJNA1215813 | 11158 | 247 | 0.896552 | 2.21448344 | Mus musculus | 10090 | Chordata | Chordata | 457 | 4.05e-124 | NTclustered | gi|354797887|gb|JN962388.1| | 10090 | g11078 | i0 | 100 | 10.9878542510121 | 247 | 0 | 100 | 0 | 1 | 247 | 8399 | 8645 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Fbxo4:tm1a(KOMP)Wtsi tm1a(KOMP)Ucd; transgenic | blastn | 2714 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22008456 | 22008456 | PRJNA1215813_P_NODE_4038_length_380_cov_1.260586_g3958_i0 | PRJNA1215813 | 4038 | 380 | 1.260586 | 4.7902268 | Mus musculus | 10090 | Chordata | Chordata | 52.8 | 0.036 | NTclustered | gi|29336304|gb|AC132616.2| | 10090 | g3958 | i0 | 100 | 0.0736842105263158 | 28 | 0 | 7 | 0 | 353 | 380 | 29020 | 28993 | Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence | blastn | 28 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22008495 | 22008495 | PRJNA1215813_P_NODE_6538_length_306_cov_1.339056_g6458_i0 | PRJNA1215813 | 6538 | 306 | 1.339056 | 4.09751136 | Spinus spinus | 160760 | Chordata | Chordata | 54.7 | 0.008 | NTclustered | gi|2917671332|emb|OZ228767.1| | 160760 | g6458 | i0 | 100 | 14.7712418300654 | 29 | 0 | 9 | 0 | 209 | 237 | 14288259 | 14288231 | Spinus spinus genome assembly, chromosome: 18 | blastn | 4520 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Fringillidae | Spinus | Spinus spinus | |
| 22008524 | 22008524 | PRJNA1215813_P_NODE_838_length_769_cov_1.272989_g772_i0 | PRJNA1215813 | 838 | 769 | 1.272989 | 9.78928541 | Zootoca vivipara | 8524 | Chordata | Chordata | 60.2 | 4.61e-4 | NTclustered | gi|2596082208|ref|XM_035124254.2| | 8524 | g772 | i0 | 100 | 0.23927178153446 | 32 | 0 | 4 | 0 | 586 | 617 | 2580 | 2611 | PREDICTED: Zootoca vivipara immunoglobulin like and fibronectin type III domain containing 1 (IGFN1), mRNA | blastn | 184 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Lepidosauria | Squamata | Lacertidae | Zootoca | Zootoca vivipara | |
| 23284024 | 23284024 | PRJNA1215813_P_NODE_959_length_731_cov_2.481763_g886_i0 | PRJNA1215813 | 959 | 731 | 2.481763 | 18.14168753 | Lampetra planeri | 7750 | Chordata | Chordata | 65.8 | 9.4e-6 | NTclustered | gi|2805730223|emb|OZ078528.1| | 7750 | g886 | i0 | 84.615 | 0.770177838577291 | 65 | 10 | 9 | 0 | 207 | 271 | 592787 | 592851 | Lampetra planeri genome assembly, chromosome: 43 | blastn | 563 | 65.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Hyperoartia | Petromyzontiformes | Petromyzontidae | Lampetra | Lampetra planeri | |
| 23284025 | 23284025 | PRJNA1215813_P_NODE_9639_length_252_cov_0.871508_g9559_i0 | PRJNA1215813 | 9639 | 252 | 0.871508 | 2.19620016 | Mus musculus | 10090 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|1907076220|ref|XM_006513908.5| | 10090 | g9559 | i0 | 100 | 13.547619047619 | 252 | 0 | 100 | 0 | 1 | 252 | 4214 | 4465 | PREDICTED: Mus musculus carbohydrate sulfotransferase 11 (Chst11), transcript variant X1, mRNA | blastn | 3414 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 24557889 | 24557889 | PRJNA1215813_P_NODE_12400_length_242_cov_0.923077_g12320_i0 | PRJNA1215813 | 12400 | 242 | 0.923077 | 2.23384634 | Mus musculus | 10090 | Chordata | Chordata | 448 | 2.3799999999999995e-121 | NTclustered | gi|1907142023|ref|XM_036162415.1| | 10090 | g12320 | i0 | 100 | 100 | 242 | 0 | 100 | 0 | 1 | 242 | 1719 | 1478 | PREDICTED: Mus musculus Rap guanine nucleotide exchange factor (GEF) 4 (Rapgef4), transcript variant X2, mRNA | blastn | 24200 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;