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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1215813 · 16 ✖

analysis 1

  • blastn · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
331757 331757 PRJNA1215813_P_NODE_9541_length_252_cov_1.240223_g9461_i0 PRJNA1215813 9541 252 1.240223 3.12536196 Acaromyces ingoldii 215250 Fungi Fungi 239 1.6300000000000002e-58   NTclustered gi|1418939408|ref|XM_025521306.1| 215250 g9461 i0 83.73 100.452380952381 252 41 100 0 1 252 993 742 Acaromyces ingoldii putative ATP2-F1F0-ATPase complex, F1 beta subunit (FA10DRAFT_266013), mRNA blastn 25314 239 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Exobasidiales Cryptobasidiaceae Acaromyces Acaromyces ingoldii
1045804 1045804 PRJNA1215813_P_NODE_5421_length_332_cov_2.409266_g5341_i0 PRJNA1215813 5421 332 2.409266 7.99876312 Coleosporiaceae 106328 Fungi Fungi 457 5.669999999999999e-124   NTclustered gi|156446667|gb|EF579746.1| 27356 g5341 i0 91.592 87.7831325301205 333 24 100 3 1 332 435 106 Endocronartium harknessii from Pinus radiata 28S ribosomal RNA gene, partial sequence; intergenic spacer 1, complete sequence; and 5S ribosomal RNA gene, partial sequence blastn 29144 457 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Coleosporiaceae Endocronartium Endocronartium harknessii
1606439 1606439 PRJNA1215813_P_NODE_10122_length_250_cov_0.881356_g10042_i0 PRJNA1215813 10122 250 0.881356 2.20339 Puccinia striiformis 27350 Fungi Fungi 185 2.14e-42   NTclustered gi|2234891697|ref|XM_047946852.1| 168172 g10042 i0 81.696 81.272 224 39 89 2 1 223 798 576 Puccinia striiformis f. sp. tritici uncharacterized protein (Pst134EA_013548), mRNA blastn 20318 185 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia striiformis
5435051 5435051 PRJNA1215813_P_NODE_6605_length_304_cov_3.891775_g6525_i0 PRJNA1215813 6605 304 3.891775 11.830996 Cryptococcus deneoformans 40410 Fungi Fungi 176 1.61e-39   NTclustered gi|134113391|ref|XM_769628.1| 283643 g6525 i0 83.957 51.2138157894737 187 26 61 4 82 266 58 242 Cryptococcus neoformans var. neoformans B-3501A 40S ribosomal protein S14 (CNBF4000), partial mRNA blastn 15569 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus deneoformans
5435069 5435069 PRJNA1215813_P_NODE_7425_length_288_cov_1.088372_g7345_i0 PRJNA1215813 7425 288 1.088372 3.13451136 Rhizoctonia solani 456999 Fungi Fungi 143 1.54e-29   NTclustered gi|2086758289|ref|XM_043326520.1| 456999 g7345 i0 82.822 6.68402777777778 163 24 56 4 13 173 284 124 Rhizoctonia solani ribosomal protein S5, N-terminal domain (RhiXN_06704), partial mRNA blastn 1925 143 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Rhizoctonia Rhizoctonia solani
11810523 11810523 PRJNA1215813_P_NODE_9990_length_251_cov_0.876404_g9910_i0 PRJNA1215813 9990 251 0.876404 2.19977404 Phaffia rhodozyma 264483 Fungi Fungi 392 1.18e-104   NTclustered gi|558520076|gb|KF037195.1| 264483 g9910 i0 94.821 98.1115537848606 251 13 100 0 1 251 747 997 Phaffia rhodozyma strain CBS5905 translation elongation factor EF1-alpha (TEF-1) gene, partial cds blastn 24626 392 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Mrakiaceae Phaffia Phaffia rhodozyma
14360748 14360748 PRJNA1215813_P_NODE_3072_length_431_cov_2.094972_g2992_i0 PRJNA1215813 3072 431 2.094972 9.02932932 Jaminaea rosea 1569628 Fungi Fungi 176 2.37e-39   NTclustered gi|1418883847|ref|XM_025504946.1| 1569628 g2992 i0 79.087 0.610208816705336 263 50 60 3 149 407 752 491 Jaminaea rosea hypothetical protein (BDZ90DRAFT_229169), mRNA blastn 263 176 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Microstromatales   Jaminaea Jaminaea rosea
15073432 15073432 PRJNA1215813_P_NODE_7592_length_285_cov_1.448113_g7512_i0 PRJNA1215813 7592 285 1.448113 4.12712205 Pucciniales 5258 Fungi Fungi 527 3.59e-145   NTclustered gi|1567329526|gb|MK488282.1| 5264 g7512 i0 100 100 285 0 100 0 1 285 201 485 Uromyces appendiculatus voucher HMAS80583 small subunit ribosomal RNA gene, partial sequence blastn 28500 527 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Uromyces Uromyces appendiculatus
15634618 15634618 PRJNA1215813_P_NODE_10133_length_250_cov_0.881356_g10053_i0 PRJNA1215813 10133 250 0.881356 2.20339 Cystobasidium minutum 29899 Fungi Fungi 346 9.269999999999999e-91   NTclustered gi|2781623375|ref|XM_066964270.1| 1397322 g10053 i0 91.6 1 250 21 100 0 1 250 394 145 Cystobasidium minutum MCA 4210 40S ribosomal protein uS13 (P389DRAFT_154710), mRNA blastn 250 346 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
15634790 15634790 PRJNA1215813_P_NODE_953_length_734_cov_2.178517_g880_i0 PRJNA1215813 953 734 2.178517 15.99031478 Tilletiopsis washingtonensis 58919 Fungi Fungi 56.5 0.006   NTclustered gi|1423581197|ref|XM_025745741.1| 58919 g880 i0 100 0.0803814713896458 30 0 4 0 223 252 374 345 Tilletiopsis washingtonensis hypothetical protein (FA09DRAFT_61677), mRNA blastn 59 56.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
18897327 18897327 PRJNA1215813_P_NODE_1995_length_525_cov_1.730088_g1915_i0 PRJNA1215813 1995 525 1.730088 9.082962 Basidiomycota 5204 Fungi Fungi 261 7.86e-65   NTclustered gi|545693747|gb|KF233767.1| 5315 g1915 i0 80.342 57.4704761904762 351 63 66 5 24 372 510 164 Ganoderma lucidum isolate 260125-1 ribosomal protein L4 (RPL4) mRNA, complete cds blastn 30172 261 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
18897328 18897328 PRJNA1215813_P_NODE_2415_length_479_cov_2.088670_g2335_i0 PRJNA1215813 2415 479 2.08867 10.0047293 Rhodotorula 5533 Fungi Fungi 342 2.4699999999999994e-89   NTclustered gi|1069924879|ref|XM_018414273.1| 578459 g2335 i0 84.956 15.8246346555324 339 49 71 2 16 353 113 450 Rhodotorula graminis WP1 uncharacterized protein (RHOBADRAFT_43715), partial mRNA blastn 7580 342 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Rhodotorula Rhodotorula graminis
19457896 19457896 PRJNA1215813_P_NODE_9836_length_251_cov_1.134831_g9756_i0 PRJNA1215813 9836 251 1.134831 2.84842581 Vanrija albida 181172 Fungi Fungi 268 2.07e-67   NTclustered gi|2837706856|ref|XM_069349821.1| 181172 g9756 i0 86.345 52.2788844621514 249 30 98 4 5 251 492 246 Vanrija albida ras GTPase (ypt1), partial mRNA blastn 13122 268 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Trichosporonales Trichosporonaceae Vanrija Vanrija albida
20733274 20733274 PRJNA1215813_P_NODE_9177_length_254_cov_2.287293_g9097_i0 PRJNA1215813 9177 254 2.287293 5.80972422 Tilletiopsis washingtonensis 58919 Fungi Fungi 78.7 3.8e-10   NTclustered gi|1423586809|ref|XM_025743193.1| 58919 g9097 i0 84.337 0.326771653543307 83 9 32 4 50 130 266 186 Tilletiopsis washingtonensis putative 40S ribosomal protein S12 (FA09DRAFT_331821), mRNA blastn 83 78.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
22008412 22008412 PRJNA1215813_P_NODE_1738_length_566_cov_1.036511_g1659_i0 PRJNA1215813 1738 566 1.036511 5.86665226 Puccinia graminis 5297 Fungi Fungi 1007 0   NTclustered gi|2620229977|ref|XR_009656884.1| 418459 g1659 i0 98.763 103.93816254417 566 7 100 0 1 566 1529 2094 Puccinia graminis f. sp. tritici CRL 75-36-700-3 28S ribosomal RNA (PGTG_24003), partial rRNA blastn 58829 1007 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia graminis
23284018 23284018 PRJNA1215813_P_NODE_8959_length_259_cov_1.252688_g8879_i0 PRJNA1215813 8959 259 1.252688 3.24446192 Suillus fuscotomentosus 1912939 Fungi Fungi 52.8 0.024   NTclustered gi|2033176635|ref|XM_041368881.1| 1912939 g8879 i0 100 0.432432432432432 28 0 11 0 29 56 240 213 Suillus fuscotomentosus uncharacterized protein (F5891DRAFT_1201430), partial mRNA blastn 112 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Suillaceae Suillus Suillus fuscotomentosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;