contig_metadata
22 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1045797 | 1045797 | PRJNA1215813_P_NODE_2141_length_507_cov_2.836406_g2061_i0 | PRJNA1215813 | 2141 | 507 | 2.836406 | 14.38057842 | Nocardiaceae | 85025 | Bacteria | Bacteria | 937 | 0 | NTclustered | gi|2589057681|gb|CP135915.1| | 293050 | g2061 | i0 | 100 | 392.483234714004 | 507 | 0 | 100 | 0 | 1 | 507 | 436172 | 436678 | Rhodococcoides kroppenstedtii strain K07-23T chromosome, complete genome | blastn | 198989 | 937 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcoides | Rhodococcoides kroppenstedtii | ||
| 2321142 | 2321142 | PRJNA1215813_P_NODE_10902_length_248_cov_0.891429_g10822_i0 | PRJNA1215813 | 10902 | 248 | 0.891429 | 2.21074392 | Cellulomonas | 1707 | Bacteria | Bacteria | 80.5 | 1.03e-10 | NTclustered | gi|1540063786|emb|LR134387.1| | 1708 | g10822 | i0 | 87.143 | 7.20161290322581 | 70 | 9 | 28 | 0 | 171 | 240 | 1562157 | 1562226 | Cellulomonas fimi strain NCTC7547 genome assembly, chromosome: 1 | blastn | 1786 | 80.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Cellulomonadaceae | Cellulomonas | Cellulomonas fimi | ||
| 2882650 | 2882650 | PRJNA1215813_P_NODE_12523_length_242_cov_0.923077_g12443_i0 | PRJNA1215813 | 12523 | 242 | 0.923077 | 2.23384634 | Christensenella sp. | 1935934 | Bacteria | Bacteria | 300 | 7.05e-77 | NTclustered | gi|2189457697|gb|CP091723.1| | 1935934 | g12443 | i0 | 91.031 | 854.681818181818 | 223 | 19 | 92 | 1 | 19 | 240 | 544776 | 544554 | MAG: Christensenella sp. isolate nC33_lr_bin.267.fa chromosome | blastn | 206833 | 300 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Christensenellales | Christensenellaceae | Christensenella | Christensenella sp. | ||
| 2882713 | 2882713 | PRJNA1215813_P_NODE_5643_length_327_cov_1.228346_g5563_i0 | PRJNA1215813 | 5643 | 327 | 1.228346 | 4.01669142 | Lentzea guizhouensis | 1586287 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|1050298341|gb|CP016793.1| | 1586287 | g5563 | i0 | 92.105 | 0.201834862385321 | 38 | 3 | 12 | 0 | 38 | 75 | 7713625 | 7713588 | Lentzea guizhouensis strain DHS C013 chromosome, complete genome | blastn | 66 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Lentzea | Lentzea guizhouensis | ||
| 2882753 | 2882753 | PRJNA1215813_P_NODE_7623_length_284_cov_2.218009_g7543_i0 | PRJNA1215813 | 7623 | 284 | 2.218009 | 6.29914556 | Synechococcus sp. CBW1107 | 2789857 | Bacteria | Bacteria | 137 | 7.04e-28 | NTclustered | gi|2638498304|emb|OY986430.1| | 2789857 | g7543 | i0 | 79 | 12.669014084507 | 200 | 42 | 70 | 0 | 41 | 240 | 1782203 | 1782402 | Synechococcus sp. CBW1107 isolate KAC_114 genome assembly, chromosome: 1 | blastn | 3598 | 137 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. CBW1107 | |
| 4158755 | 4158755 | PRJNA1215813_P_NODE_2704_length_459_cov_1.098446_g2624_i0 | PRJNA1215813 | 2704 | 459 | 1.098446 | 5.04186714 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 60.2 | 2.66e-4 | NTclustered | gi|2893356068|emb|OZ220491.1| | 2201156 | g2624 | i0 | 97.143 | 0.137254901960784 | 35 | 1 | 8 | 0 | 215 | 249 | 2527342 | 2527376 | MAG: Acidimicrobiales bacterium isolate 383ba79e-94a5-4396-b72d-754c03a60d81 genome assembly, chromosome: 1 | blastn | 63 | 60.2 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 7985103 | 7985103 | PRJNA1215813_P_NODE_12027_length_244_cov_0.912281_g11947_i0 | PRJNA1215813 | 12027 | 244 | 0.912281 | 2.22596564 | Lentzea sp. JNUCC 0626 | 3367513 | Bacteria | Bacteria | 58.4 | 4.73e-4 | NTclustered | gi|2837414742|gb|CP171635.1| | 3367513 | g11947 | i0 | 100 | 0.241803278688525 | 31 | 0 | 13 | 0 | 144 | 174 | 6040136 | 6040106 | Lentzea sp. JNUCC 0626 strain JNUCC chromosome, complete genome | blastn | 59 | 58.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Lentzea | Lentzea sp. JNUCC 0626 | ||
| 10535534 | 10535534 | PRJNA1215813_P_NODE_10429_length_249_cov_0.886364_g10349_i0 | PRJNA1215813 | 10429 | 249 | 0.886364 | 2.20704636 | Streptomyces sp. NBC_00582 | 2975783 | Bacteria | Bacteria | 195 | 3.5399999999999996e-45 | NTclustered | gi|2667469075|gb|CP107772.1| | 2975783 | g10349 | i0 | 80.8 | 76.8714859437751 | 250 | 46 | 100 | 2 | 1 | 249 | 6486101 | 6485853 | Streptomyces sp. NBC_00582 chromosome, complete genome | blastn | 19141 | 195 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_00582 | ||
| 10535561 | 10535561 | PRJNA1215813_P_NODE_12609_length_241_cov_2.321429_g12529_i0 | PRJNA1215813 | 12609 | 241 | 2.321429 | 5.59464389 | Clostridium cadaveris | 1529 | Bacteria | Bacteria | 71.3 | 5.99e-8 | NTclustered | gi|2154003691|gb|CP076620.1| | 1529 | g12529 | i0 | 90.566 | 0.219917012448133 | 53 | 5 | 22 | 0 | 41 | 93 | 2478644 | 2478696 | Clostridium cadaveris strain IFB3C5 chromosome, complete genome | blastn | 53 | 71.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium cadaveris | ||
| 11810375 | 11810375 | PRJNA1215813_P_NODE_11890_length_244_cov_0.912281_g11810_i0 | PRJNA1215813 | 11890 | 244 | 0.912281 | 2.22596564 | Streptomyces sp. Je 1-369 | 2966192 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2410828879|gb|CP101750.1| | 2966192 | g11810 | i0 | 100 | 0.114754098360656 | 28 | 0 | 11 | 0 | 162 | 189 | 2438542 | 2438515 | Streptomyces sp. Je 1-369 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. Je 1-369 | ||
| 13085355 | 13085355 | PRJNA1215813_P_NODE_11631_length_245_cov_0.906977_g11551_i0 | PRJNA1215813 | 11631 | 245 | 0.906977 | 2.22209365 | Brevibacillus brevis | 1393 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1539922203|emb|LR134338.1| | 1393 | g11551 | i0 | 100 | 0.228571428571429 | 28 | 0 | 11 | 0 | 152 | 179 | 2323372 | 2323345 | Brevibacillus brevis strain NCTC2611 genome assembly, chromosome: 1 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Brevibacillus | Brevibacillus brevis | ||
| 15073409 | 15073409 | PRJNA1215813_P_NODE_10832_length_248_cov_0.891429_g10752_i0 | PRJNA1215813 | 10832 | 248 | 0.891429 | 2.21074392 | root | 1 | Root_unresolved | Root_unresolved | 459 | 1.13e-124 | NTclustered | gi|1663099664|gb|CP039167.1| | 1280 | g10752 | i0 | 100 | 100 | 248 | 0 | 100 | 0 | 1 | 248 | 2842784 | 2843031 | Staphylococcus aureus strain R50 chromosome, complete genome | blastn | 24800 | 459 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 15073430 | 15073430 | PRJNA1215813_P_NODE_7412_length_288_cov_1.451163_g7332_i0 | PRJNA1215813 | 7412 | 288 | 1.451163 | 4.17934944 | Nocardiaceae | 85025 | Bacteria | Bacteria | 532 | 7.8e-147 | NTclustered | gi|2589057681|gb|CP135915.1| | 293050 | g7332 | i0 | 100 | 398.6875 | 288 | 0 | 100 | 0 | 1 | 288 | 435542 | 435829 | Rhodococcoides kroppenstedtii strain K07-23T chromosome, complete genome | blastn | 114822 | 532 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcoides | Rhodococcoides kroppenstedtii | ||
| 16348311 | 16348311 | PRJNA1215813_P_NODE_8233_length_273_cov_1.465000_g8153_i0 | PRJNA1215813 | 8233 | 273 | 1.465 | 3.99945 | root | 1 | Root_unresolved | Root_unresolved | 488 | 1.6099999999999996e-133 | NTclustered | gi|2484084529|gb|CP121497.1| | 1282 | g8153 | i0 | 98.901 | 152 | 273 | 3 | 100 | 0 | 1 | 273 | 896904 | 897176 | Staphylococcus epidermidis strain 24FSE04 chromosome, complete genome | blastn | 41496 | 488 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 18897336 | 18897336 | PRJNA1215813_P_NODE_7895_length_279_cov_3.053398_g7815_i0 | PRJNA1215813 | 7895 | 279 | 3.053398 | 8.51898042 | Streptomyces | 1883 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2028478505|gb|CP073042.1| | 371608 | g7815 | i0 | 100 | 0.211469534050179 | 28 | 0 | 10 | 0 | 78 | 105 | 4017220 | 4017247 | Streptomyces philanthi bv. triangulum 23Af2, complete genome sequence | blastn | 59 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Candidatus Streptomyces philanthi | ||
| 19457725 | 19457725 | PRJNA1215813_P_NODE_11216_length_247_cov_0.896552_g11136_i0 | PRJNA1215813 | 11216 | 247 | 0.896552 | 2.21448344 | Streptacidiphilus sp. P02-A3a | 2704468 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1886153837|gb|CP048289.1| | 2704468 | g11136 | i0 | 96.774 | 0.125506072874494 | 31 | 1 | 13 | 0 | 135 | 165 | 8541783 | 8541753 | Streptacidiphilus sp. P02-A3a chromosome, complete genome | blastn | 31 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptacidiphilus | Streptacidiphilus sp. P02-A3a | ||
| 20733148 | 20733148 | PRJNA1215813_P_NODE_12057_length_243_cov_1.823529_g11977_i0 | PRJNA1215813 | 12057 | 243 | 1.823529 | 4.43117547 | uncultured Thermoleophilaceae bacterium | 349283 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2874253973|emb|OY970298.1| | 349283 | g11977 | i0 | 100 | 0.11522633744856 | 28 | 0 | 12 | 0 | 178 | 205 | 915212 | 915239 | MAG: uncultured Thermoleophilaceae bacterium isolate MFD04935.bin.1.10 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Thermoleophilales | Thermoleophilaceae | uncultured Thermoleophilaceae bacterium | |||
| 21447702 | 21447702 | PRJNA1215813_P_NODE_5217_length_338_cov_1.132075_g5137_i0 | PRJNA1215813 | 5217 | 338 | 1.132075 | 3.8264135 | Fimbriimonas | 1005038 | Bacteria | Bacteria | 422 | 2.11e-113 | NTclustered | gi|663071213|gb|CP007139.1| | 661478 | g5137 | i0 | 89.381 | 143.786982248521 | 339 | 31 | 100 | 4 | 1 | 338 | 28703 | 28369 | Fimbriimonas ginsengisoli Gsoil 348, complete genome | blastn | 48600 | 422 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadaceae | Fimbriimonas | Fimbriimonas ginsengisoli | ||
| 22008385 | 22008385 | PRJNA1215813_P_NODE_11018_length_247_cov_0.896552_g10938_i0 | PRJNA1215813 | 11018 | 247 | 0.896552 | 2.21448344 | Arthrobacter sp. NicSoilC5 | 2831000 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2089593438|dbj|AP024660.1| | 2831000 | g10938 | i0 | 94.118 | 0.137651821862348 | 34 | 2 | 14 | 0 | 76 | 109 | 1894775 | 1894742 | Arthrobacter sp. NicSoilC5 DNA, complete genome | blastn | 34 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter sp. NicSoilC5 | ||
| 24557868 | 24557868 | PRJNA1215813_P_NODE_1000_length_719_cov_4.168731_g927_i0 | PRJNA1215813 | 1000 | 719 | 4.168731 | 29.97317589 | Clavibacter seminis | 2860285 | Bacteria | Bacteria | 58.4 | 0.002 | NTclustered | gi|2187984480|gb|CP083439.1| | 2860285 | g927 | i0 | 100 | 0.0848400556328234 | 31 | 0 | 4 | 0 | 571 | 601 | 2714627 | 2714657 | Clavibacter sp. A6099 chromosome, complete genome | blastn | 61 | 58.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Clavibacter | Clavibacter seminis | ||
| 24557935 | 24557935 | PRJNA1215813_P_NODE_4420_length_364_cov_2.000000_g4340_i0 | PRJNA1215813 | 4420 | 364 | 2 | 7.28 | Fictibacillus sp. KU28468 | 2991053 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2328448629|gb|CP110666.1| | 2991053 | g4340 | i0 | 100 | 0.0769230769230769 | 28 | 0 | 8 | 0 | 288 | 315 | 3334048 | 3334075 | Fictibacillus sp. KU28468 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Fictibacillaceae | Fictibacillus | Fictibacillus sp. KU28468 | ||
| 24558021 | 24558021 | PRJNA1215813_P_NODE_9760_length_252_cov_0.871508_g9680_i0 | PRJNA1215813 | 9760 | 252 | 0.871508 | 2.19620016 | Laceyella sacchari | 37482 | Bacteria | Bacteria | 335 | 2.0299999999999998e-87 | NTclustered | gi|2294964232|gb|CP103866.1| | 37482 | g9680 | i0 | 90.8 | 767.531746031746 | 250 | 23 | 99 | 0 | 1 | 250 | 114066 | 113817 | Laceyella sacchari strain FBKL4.014 chromosome, complete genome | blastn | 193418 | 335 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Thermoactinomycetaceae | Laceyella | Laceyella sacchari |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;