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contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA1215813" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA1215813 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4158766 4158766 PRJNA1215813_P_NODE_3524_length_404_cov_2.296073_g3444_i0 PRJNA1215813 3524 404 2.296073 9.27613492 Soliformovum irregulare 435424 Evosea other_Eukaryota 616 1.0999999999999996e-171   NTclustered gi|146448863|gb|EF513199.1| 435424 g3444 i0 94.486 75.6559405940594 399 22 99 0 1 399 701 303 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 30565 616 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
4158833 4158833 PRJNA1215813_P_NODE_8264_length_272_cov_1.648241_g8184_i0 PRJNA1215813 8264 272 1.648241 4.48321552 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 215 3.01e-51   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g8184 i0 80.882 98.9338235294118 272 52 100 0 1 272 149 420 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 26910 215 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5434951 5434951 PRJNA1215813_P_NODE_1345_length_632_cov_7.994633_g1268_i0 PRJNA1215813 1345 632 7.994633 50.52608056 Dictyostelium purpureum 5786 Evosea other_Eukaryota 104 1.71e-17   NTclustered gi|330790854|ref|XM_003283463.1| 5786 g1268 i0 73.759 0.67246835443038 282 66 44 6 110 390 118 392 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_93471), partial mRNA blastn 425 104 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
6709658 6709658 PRJNA1215813_P_NODE_8546_length_267_cov_1.206186_g8466_i0 PRJNA1215813 8546 267 1.206186 3.22051662 Heterostelium album 2086695 Evosea other_Eukaryota 52.8 0.024   NTclustered gi|1160572212|ref|XM_020576284.1| 670386 g8466 i0 100 0.104868913857678 28 0 10 0 182 209 633 606 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
7985174 7985174 PRJNA1215813_P_NODE_4567_length_359_cov_1.087413_g4487_i0 PRJNA1215813 4567 359 1.087413 3.90381267 Dictyostelium discoideum 44689 Evosea other_Eukaryota 60.2 2.03e-4   NTclustered gi|66809910|ref|XM_633587.1| 352472 g4487 i0 94.737 1.66295264623955 38 2 11 0 253 290 2813 2776 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0284255) mRNA, complete cds blastn 597 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
8698801 8698801 PRJNA1215813_P_NODE_1947_length_533_cov_2.517391_g1867_i0 PRJNA1215813 1947 533 2.517391 13.41769403 Dictyostelium 5782 Evosea other_Eukaryota 300 1.69e-76   NTclustered gi|2274919|emb|AJ000063.1| 44689 g1867 i0 80.457 74.9174484052533 394 75 74 2 23 415 495 103 Dictyostelium discoideum mRNA for ADP-ribosylation factor 1 blastn 39931 300 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
9259753 9259753 PRJNA1215813_P_NODE_5308_length_336_cov_1.186312_g5228_i0 PRJNA1215813 5308 336 1.186312 3.98600832 Cavenderia fasciculata 261658 Evosea other_Eukaryota 326 1.69e-84   NTclustered gi|470239206|ref|XM_004351317.1| 261658 g5228 i0 84.923 36.9940476190476 325 45 96 3 3 325 323 1 Cavenderia fasciculata Rho GTPase (rac1A), partial mRNA blastn 12430 326 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
10535578 10535578 PRJNA1215813_P_NODE_2329_length_488_cov_1.918072_g2249_i0 PRJNA1215813 2329 488 1.918072 9.36019136 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 255 3.38e-63   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g2249 i0 81.329 63.2377049180328 316 58 65 1 48 362 422 107 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30860 255 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11810399 11810399 PRJNA1215813_P_NODE_1710_length_569_cov_2.711694_g1632_i0 PRJNA1215813 1710 569 2.711694 15.42953886 Soliformovum irregulare 435424 Evosea other_Eukaryota 839 0   NTclustered gi|146448863|gb|EF513199.1| 435424 g1632 i0 94.182 92.3585237258348 550 32 97 0 1 550 659 1208 Soliformovum irregulare elongation factor 1A (EF1A) gene, partial cds blastn 52552 839 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum irregulare
11810428 11810428 PRJNA1215813_P_NODE_3370_length_413_cov_11.173529_g3290_i0 PRJNA1215813 3370 413 11.173529 46.14667477 Dictyostelium discoideum 44689 Evosea other_Eukaryota 278 6.02e-70   NTclustered gi|167938|gb|M23749.1|DDIUBIQB 44689 g3290 i0 80.052 85.8934624697337 386 67 93 10 29 411 385 7 D.discoideum ubiquitin mRNA, complete cds, clone DCUBV45 blastn 35474 278 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
13085400 13085400 PRJNA1215813_P_NODE_2971_length_439_cov_1.224044_g2891_i0 PRJNA1215813 2971 439 1.224044 5.37355316 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 292 2.3e-74   NTclustered gi|927486|emb|X79205.1| 5755 g2891 i0 81.117 64.3371298405467 376 61 84 6 3 370 773 1146 A.castellanii mRNA for methionine adenosyltransferase blastn 28244 292 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13085492 13085492 PRJNA1215813_P_NODE_8871_length_261_cov_1.042553_g8791_i0 PRJNA1215813 8871 261 1.042553 2.72106333 Cavenderia fasciculata 261658 Evosea other_Eukaryota 128 3.84e-25   NTclustered gi|470248789|ref|XM_004357881.1| 261658 g8791 i0 80.233 0.659003831417625 172 32 66 2 5 175 313 143 Cavenderia fasciculata inositol-3-phosphate synthase (ino1), partial mRNA blastn 172 128 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
14360760 14360760 PRJNA1215813_P_NODE_412_length_1029_cov_105.780335_g349_i1 PRJNA1215813 412 1029 105.780335 1088.47964715 Vannella sp. GERL14 1002217 Discosea other_Eukaryota 673 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g349 i1 95.54 39.8726919339164 426 9 41 6 2 418 427 3 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 41029 673 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
14360847 14360847 PRJNA1215813_P_NODE_9532_length_252_cov_1.307263_g9452_i0 PRJNA1215813 9532 252 1.307263 3.29430276 Dictyostelium purpureum 5786 Evosea other_Eukaryota 202 2.14e-47   NTclustered gi|330822624|ref|XM_003291701.1| 5786 g9452 i0 82.684 18.0714285714286 231 37 91 3 9 238 652 424 Dictyostelium purpureum vacuolar H+ ATPase B subunit (DICPUDRAFT_50012), mRNA blastn 4554 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
14360848 14360848 PRJNA1215813_P_NODE_972_length_727_cov_1.105505_g899_i0 PRJNA1215813 972 727 1.105505 8.03702135 Dictyostelium purpureum 5786 Evosea other_Eukaryota 501 6.01e-137   NTclustered gi|330798428|ref|XM_003287207.1| 5786 g899 i0 79.282 24.3177441540578 724 144 99 6 5 723 541 1263 Dictyostelium purpureum 26S proteasome subunit ATPase 5 (DICPUDRAFT_91882), mRNA blastn 17679 501 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15073439 15073439 PRJNA1215813_P_NODE_9712_length_252_cov_0.871508_g9632_i0 PRJNA1215813 9712 252 0.871508 2.19620016 Acytostelium 133407 Evosea other_Eukaryota 185 2.16e-42   NTclustered gi|355336743|gb|JN048898.1| 361139 g9632 i0 80.488 5.61507936507936 246 44 97 4 1 244 505 748 Acytostelium subglobosum clone ADB0000293 ribosomal protein S2 gene, complete cds blastn 1415 185 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
15634655 15634655 PRJNA1215813_P_NODE_1333_length_636_cov_1.944938_g1256_i0 PRJNA1215813 1333 636 1.944938 12.36980568 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 372 4.27e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g1256 i0 78.109 77.0911949685535 603 120 94 11 39 635 607 11 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 49030 372 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19457805 19457805 PRJNA1215813_P_NODE_396_length_1052_cov_103.213483_g349_i0 PRJNA1215813 396 1052 103.213483 1085.80584116 Vannella sp. GERL14 1002217 Discosea other_Eukaryota 673 0   NTclustered gi|327391632|gb|HM363630.1| 1002217 g349 i0 95.54 39.0009505703422 426 9 40 6 2 418 427 3 Vannella sp. GERL14 small subunit ribosomal RNA gene, partial sequence blastn 41029 673 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. GERL14
20733156 20733156 PRJNA1215813_P_NODE_1517_length_602_cov_2.561437_g1440_i0 PRJNA1215813 1517 602 2.561437 15.41985074 Heterostelium album 2086695 Evosea other_Eukaryota 411 8.539999999999998e-110   NTclustered gi|1160575692|ref|XM_020582586.1| 670386 g1440 i0 81.6 7.60299003322259 500 88 83 4 9 506 1 498 Polysphondylium pallidum PN500 Ras GTPase (rasW), partial mRNA blastn 4577 411 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
22008446 22008446 PRJNA1215813_P_NODE_3478_length_407_cov_5.517964_g3398_i0 PRJNA1215813 3478 407 5.517964 22.45811348 Vannella septentrionalis 197531 Discosea other_Eukaryota 582 1.1199999999999999e-161   NTclustered gi|300078499|gb|GU001161.1| 197531 g3398 i0 92.326 94.4398034398034 417 20 100 9 1 407 3414 3828 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 38437 582 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
22008547 22008547 PRJNA1215813_P_NODE_9778_length_252_cov_0.871508_g9698_i0 PRJNA1215813 9778 252 0.871508 2.19620016 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 6e-43   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g9698 i0 81.176 1.20634920634921 255 28 94 5 16 251 944 691 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 304 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;