RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA1215774" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA1215774 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3596006 3596006 PRJNA1215774_P_NODE_1443_length_1677_cov_3.796758_g1322_i0 PRJNA1215774 1443 1677 3.796758 63.67163166 Orthorubulavirus 2560195 Viruses Viruses 3059 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1322 i0 99.583 76.1717352415027 1677 7 100 0 1 1677 40 1716 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 127740 3059 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
4873755 4873755 PRJNA1215774_P_NODE_42984_length_321_cov_1.862903_g42664_i0 PRJNA1215774 42984 321 1.862903 5.97991863 Paramyxoviridae 11158 Viruses Viruses 592 1.44e-164   NTclustered gi|2721617856|gb|PP711545.1| 251774 g42664 i0 100 85.1464174454829 320 0 99 0 2 321 1977 1658 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 27332 592 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
6148354 6148354 PRJNA1215774_P_NODE_225_length_3072_cov_4.965322_g197_i0 PRJNA1215774 225 3072 4.965322 152.53469184 Orthorubulavirus 2560195 Viruses Viruses 5646 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g197 i0 99.837 84.2975260416667 3072 5 100 0 1 3072 3094 6165 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 258962 5651 0.999115200849407 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
8698655 8698655 PRJNA1215774_P_NODE_4927_length_991_cov_2.705882_g4677_i0 PRJNA1215774 4927 991 2.705882 26.81529062 Orthorubulavirus 2560195 Viruses Viruses 1805 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g4677 i0 99.596 83.7860746720484 990 2 99 1 1 990 1743 2730 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 83032 1818 0.992849284928493 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17623483 17623483 PRJNA1215774_P_NODE_68114_length_251_cov_1.730337_g67794_i0 PRJNA1215774 68114 251 1.730337 4.34314587 Orthorubulavirus 2560195 Viruses Viruses 453 5.34e-123   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g67794 i0 99.203 69.2948207171315 251 2 100 0 1 251 6459 6209 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 17393 453 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18897224 18897224 PRJNA1215774_P_NODE_58235_length_275_cov_1.594059_g57915_i0 PRJNA1215774 58235 275 1.594059 4.38366225 Paramyxoviridae 11158 Viruses Viruses 508 1.2499999999999999e-139   NTclustered gi|2721617856|gb|PP711545.1| 251774 g57915 i0 100 67.7309090909091 275 0 100 0 1 275 11569 11295 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 18626 508 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
21447353 21447353 PRJNA1215774_P_NODE_1117_length_1841_cov_4.607466_g1021_i0 PRJNA1215774 1117 1841 4.607466 84.82344906 Orthorubulavirus 2560195 Viruses Viruses 3395 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g1021 i0 99.946 82.835958718088 1841 1 100 0 1 1841 6501 8341 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 152501 3395 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;