RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1215774" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 2 ✖

bioproject 1

  • PRJNA1215774 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6148415 6148415 PRJNA1215774_P_NODE_33105_length_367_cov_1.585034_g32785_i0 PRJNA1215774 33105 367 1.585034 5.8170747799999996 Myrmecia 13617 Plants Plants 678 0   NTclustered gi|1158556075|emb|LT717549.1| 1938899 g32785 i0 100 99.4032697547684 367 0 100 0 1 367 148 514 Chlorobiont of Psora decipiens partial 26S rRNA gene, isolate Ger1-Swe blastn 36481 678 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       chlorobiont of Psora decipiens
9973765 9973765 PRJNA1215774_P_NODE_51188_length_294_cov_2.484163_g50868_i0 PRJNA1215774 51188 294 2.484163 7.30343922 Myrmecia 13617 Plants Plants 544 3.69e-150   NTclustered gi|168144|gb|M62995.1|FRIUGEAA 3171 g50868 i0 100 98.5986394557823 294 0 100 0 1 294 938 645 Friedmannia israeliensis 18S ribosomal RNA gene blastn 28988 544 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia Myrmecia israelensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;