RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1214993 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7983707 7983707 PRJNA1214993_P_NODE_16847_length_273_cov_1.155000_g16661_i0 PRJNA1214993 16847 273 1.155 3.15315 Linderina pennispora 61395 Fungi Fungi 228 3.879999999999999e-55   NTclustered gi|2028325604|ref|XM_040889545.1| 61395 g16661 i0 82.625 30.5384615384615 259 43 95 2 11 268 473 216 Linderina pennispora 40S ribosomal protein S9 (DL89DRAFT_279070), partial mRNA blastn 8337 228 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
7983835 7983835 PRJNA1214993_P_NODE_7207_length_402_cov_1.258359_g7022_i0 PRJNA1214993 7207 402 1.258359 5.05860318 Linderina pennispora 61395 Fungi Fungi 339 2.64e-88   NTclustered gi|2028316258|ref|XM_040883092.1| 61395 g7022 i0 86.452 65.9427860696517 310 41 77 1 85 394 234 542 Linderina pennispora putative 40S ribosomal protein RPS20 (DL89DRAFT_110176), mRNA blastn 26509 339 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
19456374 19456374 PRJNA1214993_P_NODE_19376_length_254_cov_1.723757_g19190_i0 PRJNA1214993 19376 254 1.723757 4.37834278 Linderina pennispora 61395 Fungi Fungi 178 3.65e-40   NTclustered gi|2028315102|ref|XM_040885339.1| 61395 g19190 i0 80.335 29.4212598425197 239 43 93 4 12 248 244 480 Linderina pennispora malate synthase A (DL89DRAFT_255375), partial mRNA blastn 7473 178 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
19456431 19456431 PRJNA1214993_P_NODE_26896_length_197_cov_20.209677_g26710_i0 PRJNA1214993 26896 197 20.209677 39.81306369 Basidiobolus ranarum 34480 Fungi Fungi 189 1.2499999999999996e-43   NTclustered gi|82398540|gb|DQ273807.1| 34480 g26710 i0 94.309 86.253807106599 123 7 62 0 1 123 2573 2695 Basidiobolus ranarum isolate AFTOL-ID 301 28S ribosomal RNA gene, partial sequence blastn 16992 189 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;