RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA1214993" and tax_phylum = "Preaxostyla"

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tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1214993 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2881312 2881312 PRJNA1214993_P_NODE_6003_length_438_cov_1.032877_g5818_i0 PRJNA1214993 6003 438 1.032877 4.52400126 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.042   NTclustered gi|2794957796|ref|XM_067864654.1| 2049356 g5818 i0 100 0.0639269406392694 28 0 6 0 247 274 1975 1948 Monocercomonoides exilis putative TLD (MONOS_12068fu12775fu16514), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
19456459 19456459 PRJNA1214993_P_NODE_5636_length_451_cov_2.386243_g5451_i0 PRJNA1214993 5636 451 2.386243 10.76195593 Blattamonas nauphoetae 2049346 Preaxostyla other_Eukaryota 91.6 9.26e-14   NTclustered gi|1270119057|gb|MG264531.1| 2049346 g5451 i0 88.462 18.920177383592 78 5 17 4 1 77 220 146 Blattamonas nauphoetae strain Z61EP small subunit ribosomal RNA gene, partial sequence blastn 8533 91.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida   Blattamonas Blattamonas nauphoetae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;